RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TTLL9Q3SXZ7 439 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 MLIPQ5VWP3 458 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 PDPK2PQ6A1A2 396 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 GUSBP11Q6P575 273 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 PEX26Q7Z412 305 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 HORMAD1Q86X24 394 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 ZNF433Q8N7K0 673 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-207ENST00000544052 LRRC75AQ8NAA5 344 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 LINC01555Q8NAE3 123 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 OR10J6PQ8NGY7 276 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 RNF138Q8WVD3 245 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 OR8D1Q8WZ84 308 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 RAB1CQ92928 201 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 PEBP4Q96S96 227 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 FRMD8P1Q9BZ68 369 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-207ENST00000544052 TM6SF2Q9BZW4 377 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 ADAM22Q9P0K1 906 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 ATP6V1DQ9Y5K8 247 aa2.47□□□□□ -2.01
SCFD1-207ENST00000544052 FLNBO75369 2602 aaKnown RBP2.47□□□□□ -2.01
SCFD1-207ENST00000544052 SPTY2D1-AS1A0A0U1RR47 76 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 PRAMEF26H0Y7S4 382 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 KPNA3O00505 521 aaPredicted RBP2.46□□□□□ -2.01
SCFD1-207ENST00000544052 YKT6O15498 198 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 FABP3P05413 133 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 DNAH10OSP0CZ25 163 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 SMIM10L1P0DMW3 83 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 OR5H8P0DN80 308 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 UCHL3P15374 230 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 PPP1R2P41236 205 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 RPS15AP62244 130 aaKnown RBP2.46□□□□□ -2.01
SCFD1-207ENST00000544052 GNA12Q03113 381 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 GPR176Q14439 515 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 POU2AF1Q16633 256 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 DEFB133Q30KQ1 61 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 C2orf83Q53S99 150 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 BRMS1LQ5PSV4 323 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 TEX43Q6ZNM6 134 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 Q6ZSR6 202 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 LINC00523Q86TU6 105 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 SETD3Q86TU7 594 aaPredicted RBP2.46□□□□□ -2.01
SCFD1-207ENST00000544052 SYCE1Q8N0S2 351 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 NPWQ8N729 165 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 RXFP2Q8WXD0 754 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 SMIM10Q96HG1 83 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 WFIKKN1Q96NZ8 548 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 HINT2Q9BX68 163 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 CALN1Q9BXU9 219 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 LZTFL1Q9NQ48 299 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 PCYT1BQ9Y5K3 369 aaPredicted RBP2.46□□□□□ -2.01
SCFD1-207ENST00000544052 GMEB1Q9Y692 573 aa2.46□□□□□ -2.01
SCFD1-207ENST00000544052 SHANK1Q9Y566 2161 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 NUP210LQ5VU65 1888 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 IGLV1-36A0A0B4J1U3 117 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 IGHV3-64DA0A0J9YX35 117 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 TSPAN11A1L157 253 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 LYRM9A8MSI8 78 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 CDKN2BP42772 138 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 ZNF136P52737 540 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 HMGCS1Q01581 520 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 IRF4Q15306 451 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 WDR59Q6PJI9 974 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 LYPD2Q6UXB3 125 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 C6orf120Q7Z4R8 191 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 ZNF429Q86V71 674 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 TRIML2Q8N7C3 387 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 OR2A1Q8NGT9 310 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 CCL4L1Q8NHW4 92 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 CA5BP1Q8WTZ4 195 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 PDXPQ96GD0 296 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 DNAJC1Q96KC8 554 aaKnown RBP2.46□□□□□ -2.02
SCFD1-207ENST00000544052 MICU1Q9BPX6 476 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 SLC17A9Q9BYT1 436 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 ZYG11BQ9C0D3 744 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 TMEM38AQ9H6F2 299 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 LRRC19Q9H756 370 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 ZNF331Q9NQX6 463 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-207ENST00000544052 PSG8Q9UQ74 426 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 RCL1Q9Y2P8 373 aaKnown RBP2.46□□□□□ -2.02
SCFD1-207ENST00000544052 RBMX2Q9Y388 322 aaKnown RBP2.46□□□□□ -2.02
SCFD1-207ENST00000544052 BZW2Q9Y6E2 419 aaKnown RBP2.46□□□□□ -2.02
SCFD1-207ENST00000544052 NBASA2RRP1 2371 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 HECTD1Q9ULT8 2610 aa2.46□□□□□ -2.02
SCFD1-207ENST00000544052 UBR5O95071 2799 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-207ENST00000544052 COL12A1Q99715 3063 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 NAV2Q8IVL1 2488 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 A0A1B0GUH1 482 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 WI2-2373I1.2A0A1W2PRP0 233 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 GOLGA6L4A6NEF3 574 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 NCBP2LA6PVI3 153 aaKnown RBP2.45□□□□□ -2.02
SCFD1-207ENST00000544052 A8MU10 97 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 ZNF99A8MXY4 864 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-207ENST00000544052 CA11O75493 328 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 LSM8O95777 96 aaKnown RBP2.45□□□□□ -2.02
SCFD1-207ENST00000544052 SOD1P00441 154 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 HLA-HP01893 362 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 ARG1P05089 322 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 CSNK2A2P19784 350 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-207ENST00000544052 CEACAM3P40198 252 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 ZNF138P52744 262 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms