RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 NUP37Q8NFH4 326 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF596Q8TC21 504 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 THEM6Q8WUY1 208 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 SGK3Q96BR1 496 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF479Q96JC4 524 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 POM121L2Q96KW2 1035 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 C4orf45Q96LM5 186 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 CNN2Q99439 309 aaKnown RBP4.36□□□□□ -1.71
CLIP1-217ENST00000543205 ATF6BQ99941 703 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 DHRS9Q9BPW9 319 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 COPS4Q9BT78 406 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 HDHD2Q9H0R4 259 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 OR51B6Q9H340 312 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 PLEKHF2Q9H8W4 249 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 MARCH7Q9H992 704 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 ELOVL3Q9HB03 270 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 FAIMQ9NVQ4 179 aa4.36□□□□□ -1.71
CLIP1-217ENST00000543205 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.36□□□□□ -1.71
CLIP1-217ENST00000543205 ANKHD1Q8IWZ3 2542 aaKnown RBP4.36□□□□□ -1.71
CLIP1-217ENST00000543205 PKDREJQ9NTG1 2253 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 A0A1W2PPK0 400 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 A0A1W2PPR1 153 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 UBE2QL1A1L167 161 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 ANKRD30BLA7E2S9 258 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 E7EQL1 145 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 F5H5K5 113 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 H0YJX3 145 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 CDC14BO60729 498 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 ENTPD6O75354 484 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 CLIC3O95833 236 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 LCKP06239 509 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 LYNP07948 512 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 PCSK6P29122 969 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 APOBEC3AP31941 199 aaPredicted RBP4.35□□□□□ -1.71
CLIP1-217ENST00000543205 IER3P46695 156 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 BCAP31P51572 246 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 NUDT6P53370 316 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 AQP4P55087 323 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 KRTAP10-9P60411 292 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 ADARB1P78563 741 aaKnown RBP4.35□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF691Q5VV52 312 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 SFRP4Q6FHJ7 346 aaPredicted RBP4.35□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF544Q6NX49 715 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.35□□□□□ -1.71
CLIP1-217ENST00000543205 C8orf59Q8N0T1 100 aaPredicted RBP4.35□□□□□ -1.71
CLIP1-217ENST00000543205 FBXL14Q8N1E6 418 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 LRRC75A-AS1Q8N1F1 130 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 PAQR4Q8N4S7 273 aaPredicted RBP4.35□□□□□ -1.71
CLIP1-217ENST00000543205 OR51G2Q8NGK0 314 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 OR5D13Q8NGL4 314 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 RHOXF1Q8NHV9 184 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 OTOSQ8NHW6 89 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 SMAP2Q8WU79 429 aaPredicted RBP4.35□□□□□ -1.71
CLIP1-217ENST00000543205 SPTSSAQ969W0 71 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 SLAMF6Q96DU3 332 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 LURAP1Q96LR2 239 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 MNTQ99583 582 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 YIPF3Q9GZM5 350 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 GEMIN7Q9H840 131 aaKnown RBP4.35□□□□□ -1.71
CLIP1-217ENST00000543205 TRIM36Q9NQ86 728 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 CA10Q9NS85 328 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 ATPIF1Q9UII2 106 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 GRIP1Q9Y3R0 1128 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 TMEM14AQ9Y6G1 99 aa4.35□□□□□ -1.71
CLIP1-217ENST00000543205 TMEM129A0AVI4 362 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF878C9JN71 531 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF670-ZNF695F2Z2N8 137 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 PHYHO14832 338 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 CLPTM1O96005 669 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 H2BFMP0C1H6 154 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 RRASP10301 218 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 PSKH1P11801 424 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 HSD11B1P28845 292 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 VHLP40337 213 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 HSPA13P48723 471 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 RGS6P49758 472 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 HCCSP53701 268 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 TPTEP56180 551 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 SELENOVP59797 346 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 GRB2P62993 217 aaKnown RBP4.34□□□□□ -1.71
CLIP1-217ENST00000543205 GGTLC2Q14390 218 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF829Q3KNS6 432 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-217ENST00000543205 C6orf52Q5T4I8 152 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 AGAP6Q5VW22 663 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 PYHIN1Q6K0P9 492 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 KCTD18Q6PI47 426 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-217ENST00000543205 IZUMO2Q6UXV1 221 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 SLC35F2Q8IXU6 374 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 C1orf174Q8IYL3 243 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 MUC15Q8N387 334 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF611Q8N823 705 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 OR5L1Q8NGL2 311 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 OR1J1Q8NGS3 322 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 TMEM170AQ8WVE7 144 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 ASB17Q8WXJ9 295 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 SLC7A6Q92536 515 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 NRGNQ92686 78 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 FAM71F1Q96KD3 344 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-217ENST00000543205 CCL19Q99731 98 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 BCL2L14Q9BZR8 327 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms