RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 C1orf226A1L170 272 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 SMIM30A4D0T7 59 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 FAM166BA8MTA8 275 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 F5H5T6 163 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 H3BN98 237 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 TRAPPC2LH3BP13 241 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 J3QR06 171 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 DCTN6O00399 190 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 PCDH7O60245 1069 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 CTSVO60911 334 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 PDYNP01213 254 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 H1F0P07305 194 aaKnown RBP5.07□□□□□ -1.6
XRCC4-206ENST00000542685 PRSS2P07478 247 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 DCNP07585 359 aaKnown RBP5.07□□□□□ -1.6
XRCC4-206ENST00000542685 SMIM10L2AP0DMW4 78 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 SMIM10L2BP0DMW5 78 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 PTNP21246 168 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 ZNF10P21506 573 aaPredicted RBP5.07□□□□□ -1.6
XRCC4-206ENST00000542685 HTR1FP30939 366 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 APLNRP35414 380 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 OPRD1P41143 372 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 AKR1C3P42330 323 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 PPICP45877 212 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 P2RX1P51575 399 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 PNLIPRP1P54315 467 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 UBE2NP61088 152 aaKnown RBP5.07□□□□□ -1.6
XRCC4-206ENST00000542685 CACNG1Q06432 222 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 MADCAM1Q13477 382 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 GPM6BQ13491 265 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 ZNF235Q14590 738 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 DECR1Q16698 335 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 IZUMO4Q1ZYL8 232 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 PGGHGQ32M88 737 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 HNRNPA1L2Q32P51 320 aaKnown RBP5.07□□□□□ -1.6
XRCC4-206ENST00000542685 MS4A13Q5J8X5 152 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 SOHLH1Q5JUK2 328 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 TMEM225Q6GV28 225 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 PRR27Q6MZM9 219 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 STEAP1BQ6NZ63 245 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 TEX38Q6PEX7 206 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 OPN5Q6U736 354 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 FCRLAQ7L513 359 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 GLT6D1Q7Z4J2 308 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 KLHDC8AQ8IYD2 350 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 LYG1Q8N1E2 194 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 RYBPQ8N488 228 aaPredicted RBP5.07□□□□□ -1.6
XRCC4-206ENST00000542685 TMEM156Q8N614 296 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 ZDHHC22Q8N966 263 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 OR4K14Q8NGD5 310 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 OR5L1Q8NGL2 311 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 OR6K2Q8NGY2 324 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 OR5B3Q8NH48 314 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 CXorf40AQ8TE69 158 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 Q8WTZ3 238 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 ABHD3Q8WU67 409 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 PPP1R1CQ8WVI7 109 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 SECTM1Q8WVN6 248 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 TMED6Q8WW62 240 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 DNASE2BQ8WZ79 361 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 TOMM40LQ969M1 308 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 MCHR2Q969V1 340 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 ARRDC3Q96B67 414 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 OR2V2Q96R30 315 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 SEMA3CQ99985 751 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 PKIBQ9C010 78 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 CST9LQ9H4G1 147 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 SRD5A3Q9H8P0 318 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 SGK2Q9HBY8 427 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 NOX4Q9NPH5 578 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 CLEC5AQ9NY25 188 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 FKBP11Q9NYL4 201 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 CHRNA9Q9UGM1 479 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 IL20RAQ9UHF4 553 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 ZNF223Q9UK11 482 aaPredicted RBP5.07□□□□□ -1.6
XRCC4-206ENST00000542685 PIN4Q9Y237 131 aaKnown RBP5.07□□□□□ -1.6
XRCC4-206ENST00000542685 NTNG1Q9Y2I2 539 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 ZNF337Q9Y3M9 751 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 COL4A6Q14031 1691 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 MS4A18H0YCH9 400 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 GAPDHSO14556 408 aaPredicted RBP5.06□□□□□ -1.6
XRCC4-206ENST00000542685 SLC16A5O15375 505 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 TAPBPO15533 448 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 TLX2O43763 284 aaPredicted RBP5.06□□□□□ -1.6
XRCC4-206ENST00000542685 ERAL1O75616 437 aaKnown RBP5.06□□□□□ -1.6
XRCC4-206ENST00000542685 RHBDL1O75783 438 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 SLC16A8O95907 504 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 TRGC2P03986 189 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 ARG1P05089 322 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 SEC11BP0C7V7 166 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 FOSL2P15408 326 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 ZNF7P17097 686 aaPredicted RBP5.06□□□□□ -1.6
XRCC4-206ENST00000542685 AMD1P17707 334 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 CSNK2A2P19784 350 aaPredicted RBP5.06□□□□□ -1.6
XRCC4-206ENST00000542685 CEACAM3P40198 252 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 LPAR6P43657 344 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 COMPP49747 757 aaPredicted RBP5.06□□□□□ -1.6
XRCC4-206ENST00000542685 RAB28P51157 221 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 TAS2R31P59538 309 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 UBE2KP61086 200 aa5.06□□□□□ -1.6
XRCC4-206ENST00000542685 RPL36AP83881 106 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms