RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 MDKP21741 143 aaPredicted RBP13.02□□□□□ -0.32
AC005840.4-201ENST00000541242 BLVRBP30043 206 aaPredicted RBP13.02□□□□□ -0.32
AC005840.4-201ENST00000541242 CAPZBP47756 277 aa13.02□□□□□ -0.32
AC005840.4-201ENST00000541242 SLC37A1P57057 533 aa13.02□□□□□ -0.32
AC005840.4-201ENST00000541242 OR52M1Q8NGK5 317 aa13.02□□□□□ -0.32
AC005840.4-201ENST00000541242 PLEKHA2Q9HB19 425 aa13.02□□□□□ -0.32
AC005840.4-201ENST00000541242 FBLN5Q9UBX5 448 aa13.02□□□□□ -0.32
AC005840.4-201ENST00000541242 PRODH2Q9UF12 536 aa13.02□□□□□ -0.32
AC005840.4-201ENST00000541242 LIPGQ9Y5X9 500 aa13.02□□□□□ -0.32
AC005840.4-201ENST00000541242 A0A1W2PR77 199 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 RBFOX3A6NFN3 312 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 E5RGE8 158 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 HSD17B6O14756 317 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 GIMD1P0DJR0 217 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 FASLGP48023 281 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 PPM1FP49593 454 aaPredicted RBP13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 USF2Q15853 346 aaPredicted RBP13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 LYZL2Q7Z4W2 148 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 C11orf40Q8WZ69 217 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 MVB12AQ96EY5 273 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 LURAP1Q96LR2 239 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 OR10A2Q9H208 303 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 LIME1Q9H400 295 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 NSG2Q9Y328 171 aa13.02□□□□□ -0.33
AC005840.4-201ENST00000541242 CNTRLQ7Z7A1 2325 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 ZNF724A8MTY0 619 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 RPL36A-HNRNPH2H7BZ11 118 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 K7N7A8 449 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 MT-ATP6P00846 226 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 SRFP11831 508 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 RND3P61587 244 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 HIKESHIQ53FT3 197 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 ZNF385CQ66K41 422 aaPredicted RBP13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 NUP54Q7Z3B4 507 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 RNASE11Q8TAA1 199 aaKnown RBP13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 PTPMT1Q8WUK0 201 aaPredicted RBP13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 TOMM40LQ969M1 308 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 SHDQ96IW2 340 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 ASXL3Q9C0F0 2248 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 MS4A18H0YCH9 400 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 PHOX2AO14813 284 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 CD38P28907 300 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 NOVA1P51513 510 aaKnown RBP13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 AFF3P51826 1226 aaKnown RBP13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 TAS2R46P59540 309 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 POU3F1Q03052 451 aaPredicted RBP13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 DEFB133Q30KQ1 61 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 MS4A18Q3C1V0 323 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 CYB561D1Q8N8Q1 229 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 TMEM68Q96MH6 324 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 NUDT22Q9BRQ3 303 aa13.01□□□□□ -0.33
AC005840.4-201ENST00000541242 SHANK1Q9Y566 2161 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 TMEM265A0A087WTH1 108 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 C2orf72A6NCS6 295 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 NPIPA5E9PKD4 350 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 NPIPB7O75200 414 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 OR5AC1P0C628 307 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 HSD11B2P80365 405 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 RELQ04864 619 aaPredicted RBP13□□□□□ -0.33
AC005840.4-201ENST00000541242 TMEM176BQ3YBM2 270 aaPredicted RBP13□□□□□ -0.33
AC005840.4-201ENST00000541242 C6orf201Q7Z4U5 140 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 ZNF429Q86V71 674 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 ASB10Q8WXI3 467 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 PACRGQ96M98 296 aaPredicted RBP13□□□□□ -0.33
AC005840.4-201ENST00000541242 PECRQ9BY49 303 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 GPR84Q9NQS5 396 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 MCTS1Q9ULC4 181 aaKnown RBP13□□□□□ -0.33
AC005840.4-201ENST00000541242 NPIPA1Q9UND3 350 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 STRAPQ9Y3F4 350 aaKnown RBP13□□□□□ -0.33
AC005840.4-201ENST00000541242 NCOA6Q14686 2063 aaPredicted RBP13□□□□□ -0.33
AC005840.4-201ENST00000541242 IGKV1-9A0A0C4DH69 117 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 CRYM-AS1A6NIL9 109 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 GPR137BO60478 399 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 ZNF17P17021 662 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 CD27P26842 260 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 IL2RGP31785 369 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 SLC6A8P48029 635 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 SUCLG1P53597 346 aaKnown RBP13□□□□□ -0.33
AC005840.4-201ENST00000541242 SPSB3Q6PJ21 355 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 SOHLH2Q9NX45 425 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 WASF3Q9UPY6 502 aa13□□□□□ -0.33
AC005840.4-201ENST00000541242 A0A1B0GWJ7 208 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 C5orf63A6NC05 138 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 AHSA1O95433 338 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 SRP19P09132 144 aaKnown RBP12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 IL12BP29460 328 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 PIGPP57054 158 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 SPCS3P61009 180 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 P4HA3Q7Z4N8 544 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 LRRC18Q8N456 261 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 C17orf78Q8N4C9 275 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 OR8B12Q8NGG6 310 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 TSLPQ969D9 159 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 LIN37Q96GY3 246 aaPredicted RBP12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 SNX22Q96L94 193 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 ATG101Q9BSB4 218 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 URM1Q9BTM9 101 aaKnown RBP12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 TBL1XR1Q9BZK7 514 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 VN1R1Q9GZP7 353 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 ZNF700Q9H0M5 742 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms