RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ZG16BQ96DA0 208 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 FER1L6-AS2Q96M78 137 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 SERTM2A0A1B0GWG4 89 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 GPR37O15354 613 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 GNG4P50150 75 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 FAM3AP98173 230 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 BTNL3Q6UXE8 466 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 LIAT1Q6ZQX7 453 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 GVQW1Q8N7I0 195 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 AMDHD2Q9Y303 409 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 DAOP14920 347 aa13.33□□□□□ -0.27
SMARCA4-207ENST00000541122 GLB1P16278 677 aa13.33□□□□□ -0.27
SMARCA4-207ENST00000541122 CHRNA7P36544 502 aa13.33□□□□□ -0.27
SMARCA4-207ENST00000541122 OR10G4Q8NGN3 311 aa13.33□□□□□ -0.27
SMARCA4-207ENST00000541122 OR10G9Q8NGN4 311 aa13.33□□□□□ -0.27
SMARCA4-207ENST00000541122 OR10G7Q8NGN6 311 aa13.33□□□□□ -0.27
SMARCA4-207ENST00000541122 ROBO4Q8WZ75 1007 aa13.33□□□□□ -0.27
SMARCA4-207ENST00000541122 DLEC1Q9Y238 1755 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 TMEM30CPA0ZSE6 113 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 ERVS71-1P61550 626 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 ZNF117Q03924 483 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 ZIC1Q15915 447 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 OR4D11Q8NGI4 311 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 PECRQ9BY49 303 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 DUSP13Q9UII6 198 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 MYH14Q7Z406 1995 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 EVPLQ92817 2033 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 ARID1BQ8NFD5 2236 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 OR4C45A6NMZ5 311 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 AMTP48728 403 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 SPCS3P61009 180 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 IFI44Q8TCB0 444 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 SPPL3Q8TCT6 385 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 ELSPBP1Q96BH3 223 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 MRGPRX3Q96LB0 322 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 FRRS1LQ9P0K9 344 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 RNF24Q9Y225 148 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 GAPDHP04406 335 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 RHOBP62745 196 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 MRGPRGQ86SM5 289 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 WDR61Q9GZS3 305 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 PCED1AQ9H1Q7 454 aa13.33□□□□□ -0.28
SMARCA4-207ENST00000541122 CDS2O95674 445 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 ACAA1P09110 424 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 OR3A4PP47883 348 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 CSNK1EP49674 416 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 ELOBQ15370 118 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 ZNF660Q6AZW8 331 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 PRR27Q6MZM9 219 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 BOD1Q96IK1 185 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 POM121L2Q96KW2 1035 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 A0A1B0GTH9 108 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 KHDC3LQ587J8 217 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 PUSL1Q8N0Z8 303 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 FAM181AQ8N9Y4 354 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 ANXA10Q9UJ72 324 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 PAX5Q02548 391 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 C20orf196Q8IYI0 205 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 NPEPL1Q8NDH3 523 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 OR10G3Q8NGC4 313 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 C10orf35Q96D05 121 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 ST6GALNAC2Q9UJ37 374 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 DYNLT3P51808 116 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 ZNF816Q0VGE8 651 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 LRP11Q86VZ4 500 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 C10orf111Q8N326 155 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 OR1N1Q8NGS0 311 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 TMEM191AQ9H0A3 160 aa13.32□□□□□ -0.28
SMARCA4-207ENST00000541122 RPL13AP40429 203 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 VHLLQ6RSH7 139 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 C6orf201Q7Z4U5 140 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 YRDCQ86U90 279 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 H1FXQ92522 213 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 POM121Q96HA1 1249 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 ST8SIA5O15466 376 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 CDAP32320 146 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 SMIM21Q3B7S5 101 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 LYRM7Q5U5X0 104 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 CD200R1LQ6Q8B3 271 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 OR5AU1Q8NGC0 362 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 OR4C3Q8NH37 302 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 FAAP24Q9BTP7 215 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 LILRA5A6NI73 299 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 AMER3Q8N944 861 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 OR10V1Q8NGI7 309 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 OR10G8Q8NGN5 311 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 EID2BQ96D98 161 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 CACNG5Q9UF02 275 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 PQLC2LA1A4F0 135 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 H0Y8X5 98 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 GGTLC2Q14390 218 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 PATE1Q8WXA2 126 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 EGLN1Q9GZT9 426 aa13.31□□□□□ -0.28
SMARCA4-207ENST00000541122 TRAV34A0A0B4J273 112 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 ALG1L2C9J202 215 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 IGHV3-9P01782 118 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 VDAC1P21796 283 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 GNG3P63215 75 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 GUCA2BQ16661 112 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 TRIM61Q5EBN2 209 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms