RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 OPA3Q9H6K4 179 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 IL36GQ9NZH8 169 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 MTCH1Q9NZJ7 389 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 EIF3KQ9UBQ5 218 aaKnown RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 SHANK1Q9Y566 2161 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 IGKV1D-8A0A087WSZ0 117 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 ANKRD30BLA7E2S9 258 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 SCGNO76038 276 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 RAB3DO95716 219 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 HOXD4P09016 255 aaPredicted RBP10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 VSIG10L2P0DP72 767 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 SELEP16581 610 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 CPT2P23786 658 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 RCVRNP35243 200 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 OSR2Q8N2R0 312 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 DMRTB1Q96MA1 342 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 TECTBQ96PL2 329 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 SULT4A1Q9BR01 284 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 SEC22CQ9BRL7 303 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 PRORYQ9H606 182 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 MOV10Q9HCE1 1003 aaKnown RBP10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 RANGRFQ9HD47 186 aaPredicted RBP10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 TAS2R8Q9NYW2 309 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 COPZ2Q9P299 210 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 AMDHD2Q9Y303 409 aa10.48□□□□□ -0.73
AP003559.1-201ENST00000540906 ZNF736B4DX44 427 aaPredicted RBP10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 M0R1B8 84 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 RHBDL1O75783 438 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 CYB5AP00167 134 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 CSTBP04080 98 aaKnown RBP10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 CHATP28329 748 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 HOXA4Q00056 320 aaPredicted RBP10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 NAAAQ02083 359 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 MRPL49Q13405 166 aaKnown RBP10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 FCN2Q15485 313 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 HAGHLQ6PII5 290 aaPredicted RBP10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 Q6ZPA2 131 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 OR5A2Q8NGI9 324 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 OR13C8Q8NGS7 320 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 GINS4Q9BRT9 223 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 FAAP24Q9BTP7 215 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 ACTR6Q9GZN1 396 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 CHST6Q9GZX3 395 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 TUBD1Q9UJT1 453 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 ZNF221Q9UK13 617 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 ST3GAL6Q9Y274 331 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 USP24Q9UPU5 2620 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 EPG5Q9HCE0 2579 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 HEATR1Q9H583 2144 aaKnown RBP10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 IQCF6A8MYZ5 107 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 J3QW42 95 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 MLNRO43193 412 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 PMP2P02689 132 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 AMY2AP04746 511 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 HRH1P35367 487 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 EIF2B2P49770 351 aaKnown RBP10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 RBM11P57052 281 aaKnown RBP10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 CD83Q01151 205 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 CBX3Q13185 183 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 PNLIPRP3Q17RR3 467 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 MICBQ29980 383 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 TIMM23BQ5SRD1 257 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 Q6ZR03 302 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 OR10AD1Q8NGE0 317 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 OR52B4Q8NGK2 314 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 GTF3AQ92664 365 aaKnown RBP10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 EMG1Q92979 244 aaKnown RBP10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 OR51I2Q9H344 312 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 OBP2BQ9NPH6 170 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 IFT46Q9NQC8 304 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 NPDC1Q9NQX5 325 aaPredicted RBP10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 AK3Q9UIJ7 227 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 MPC1Q9Y5U8 109 aa10.47□□□□□ -0.73
AP003559.1-201ENST00000540906 CADP27708 2225 aa10.46□□□□□ -0.73
AP003559.1-201ENST00000540906 PCNX1Q96RV3 2341 aa10.46□□□□□ -0.73
AP003559.1-201ENST00000540906 ITPR1Q14643 2758 aa10.46□□□□□ -0.73
AP003559.1-201ENST00000540906 FAM221AA4D161 298 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 PEX14O75381 377 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 DHFRP00374 187 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 TRAPPC2P0DI81 140 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 TRAPPC2BP0DI82 140 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 RAC2P15153 192 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 NAT1P18440 290 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 DUSP1P28562 367 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 OPRM1P35372 400 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 FABP6P51161 128 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 RRAS2P62070 204 aaPredicted RBP10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 ARFRP1Q13795 201 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 LY6DQ14210 128 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 SLC36A1Q7Z2H8 476 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 LRP11Q86VZ4 500 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 BPIFB2Q8N4F0 458 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 ZSCAN4Q8NAM6 433 aaPredicted RBP10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 Q8NFD4 153 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 OR11H7Q8NGC8 314 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 CPNE2Q96FN4 548 aaPredicted RBP10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 DMRTA2Q96SC8 542 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 OR51J1Q9H342 316 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 FN3KRPQ9HA64 309 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms