RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CDK5R1Q15078 307 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 LRRC10Q5BKY1 277 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 C6orf141Q5SZD1 244 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 ATPAF1Q5TC12 328 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-215ENST00000540904 IZUMO2Q6UXV1 221 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 SLC25A26Q70HW3 274 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 SERPINA12Q8IW75 414 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 ZFP41Q8N8Y5 198 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 DNAAF1Q8NEP3 725 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 OR5D14Q8NGL3 314 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 OR52N1Q8NH53 320 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 C22orf15Q8WYQ4 148 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 SLAMF9Q96A28 289 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 RFT1Q96AA3 541 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 MED30Q96HR3 178 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 GAFA1Q96PS6 74 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 SPACA5Q96QH8 159 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 PKIBQ9C010 78 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 DNTTIP1Q9H147 329 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 ZCCHC4Q9H5U6 513 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 RPUSD1Q9UJJ7 312 aaKnown RBP7.65□□□□□ -1.18
SNHG1-215ENST00000540904 SIRT4Q9Y6E7 314 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-215ENST00000540904 IGHV3OR16-10A0A075B7F0 116 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 PNMA8CA0A1B0GUJ8 204 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 SLC1A7O00341 560 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 MYL12BO14950 172 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 SIGLEC5O15389 551 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 OGG1O15527 345 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 NOS1APO75052 506 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-215ENST00000540904 ECDO95905 644 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-215ENST00000540904 LALBAP00709 142 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 LIPFP07098 398 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 SFTPBP07988 381 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 ACAA1P09110 424 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-215ENST00000540904 NDUFB7P17568 137 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 PRDX2P32119 198 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 HSPA13P48723 471 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 CEBPDP49716 269 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-215ENST00000540904 CAPZA1P52907 286 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 FGF12P61328 243 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 RIPK1Q13546 671 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 DGUOKQ16854 277 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 KLF17Q5JT82 389 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-215ENST00000540904 ZNF788Q6ZQV5 615 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 LHFPL2Q6ZUX7 228 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 PARP16Q8N5Y8 322 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 CD177Q8N6Q3 437 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 PNLDC1Q8NA58 520 aaKnown RBP7.64□□□□□ -1.19
SNHG1-215ENST00000540904 ZNF485Q8NCK3 441 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 ZNRF1Q8ND25 227 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 TMEM185AQ8NFB2 350 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 OR5D18Q8NGL1 313 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 RPS4Y2Q8TD47 263 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 GPR148Q8TDV2 347 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 H1FXQ92522 213 aaKnown RBP7.64□□□□□ -1.19
SNHG1-215ENST00000540904 RGP1Q92546 391 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-215ENST00000540904 SPSB1Q96BD6 273 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 SMIM19Q96E16 107 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 CEP19Q96LK0 163 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 OPALINQ96PE5 141 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 PCGF1Q9BSM1 259 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 ANKRD60Q9BZ19 345 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 CNTD2Q9H8S5 307 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 FKBP14Q9NWM8 211 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 SCN3BQ9NY72 215 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 MTCH1Q9NZJ7 389 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 SLC25A10Q9UBX3 287 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-215ENST00000540904 OR14J1Q9UGF5 321 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 ZNF222Q9UK12 451 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 NUP50Q9UKX7 468 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 ERGIC3Q9Y282 383 aa7.64□□□□□ -1.19
SNHG1-215ENST00000540904 ARHGAP32A7KAX9 2087 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 TRAV40A0A0B4J280 105 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 ZNF879B4DU55 563 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 F8VVB4 439 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 F8VWA3 439 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 GPR37O15354 613 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 SPRY1O43609 319 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-215ENST00000540904 TCF21O43680 179 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 SULT1B1O43704 296 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 RRP9O43818 475 aaKnown RBP7.63□□□□□ -1.19
SNHG1-215ENST00000540904 ANGPTL7O43827 346 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 TOX4O94842 621 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 CYB5AP00167 134 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 KNG1P01042 644 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 FSHBP01225 129 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 MT-ND2P03891 347 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 CDK1P06493 297 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 CD2P06729 351 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 HCKP08631 526 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 PPIAL4GP0DN37 164 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 MYF6P23409 242 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 FPR2P25090 351 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 WNT4P56705 351 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 ERVK11-1P61568 191 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 ARF6P62330 175 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 PDZK1IP1Q13113 114 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 C11orf91Q3C1V1 193 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 METTL11BQ5VVY1 283 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 DMKNQ6E0U4 476 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms