RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 MMP24Q9Y5R2 645 aa17.64■□□□□ 0.41
CCDC78-215ENST00000538176 FAM230AA0A1W2PPH8 454 aa17.63■□□□□ 0.41
CCDC78-215ENST00000538176 A6NIN4 97 aa17.63■□□□□ 0.41
CCDC78-215ENST00000538176 FADS2O95864 444 aaKnown RBP17.63■□□□□ 0.41
CCDC78-215ENST00000538176 KNG1P01042 644 aa17.63■□□□□ 0.41
CCDC78-215ENST00000538176 FBP1P09467 338 aa17.63■□□□□ 0.41
CCDC78-215ENST00000538176 UBE2E1P51965 193 aa17.63■□□□□ 0.41
CCDC78-215ENST00000538176 ERVK11-1P61568 191 aa17.63■□□□□ 0.41
CCDC78-215ENST00000538176 MRPL28Q13084 256 aaKnown RBP17.63■□□□□ 0.41
CCDC78-215ENST00000538176 UBE2V2Q15819 145 aa17.63■□□□□ 0.41
CCDC78-215ENST00000538176 TP53I3Q53FA7 332 aa17.63■□□□□ 0.41
CCDC78-215ENST00000538176 Q8N7P7 452 aa17.63■□□□□ 0.41
CCDC78-215ENST00000538176 HAVCR2Q8TDQ0 301 aa17.63■□□□□ 0.41
CCDC78-215ENST00000538176 BORCS8Q96FH0 119 aa17.63■□□□□ 0.41
CCDC78-215ENST00000538176 INPP5EQ9NRR6 644 aa17.63■□□□□ 0.41
CCDC78-215ENST00000538176 SF3B6Q9Y3B4 125 aaKnown RBP17.63■□□□□ 0.41
CCDC78-215ENST00000538176 TENM1Q9UKZ4 2725 aa17.62■□□□□ 0.41
CCDC78-215ENST00000538176 LOC100130705A0A1B0GUX0 176 aa17.62■□□□□ 0.41
CCDC78-215ENST00000538176 HTR1AP08908 422 aa17.62■□□□□ 0.41
CCDC78-215ENST00000538176 CALHM1Q8IU99 346 aa17.62■□□□□ 0.41
CCDC78-215ENST00000538176 Q8IYB0 196 aa17.62■□□□□ 0.41
CCDC78-215ENST00000538176 OR4F5Q8NH21 305 aa17.62■□□□□ 0.41
CCDC78-215ENST00000538176 RHOXF1Q8NHV9 184 aa17.62■□□□□ 0.41
CCDC78-215ENST00000538176 RDH12Q96NR8 316 aa17.62■□□□□ 0.41
CCDC78-215ENST00000538176 SLITRK2Q9H156 845 aa17.62■□□□□ 0.41
CCDC78-215ENST00000538176 SEBOXQ9HB31 216 aaPredicted RBP17.62■□□□□ 0.41
CCDC78-215ENST00000538176 NEK6Q9HC98 313 aa17.62■□□□□ 0.41
CCDC78-215ENST00000538176 SIRT7Q9NRC8 400 aa17.62■□□□□ 0.41
CCDC78-215ENST00000538176 A0A0U1RQK1 487 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 LOC107986453A0A1B0GWG9 222 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 FAM181BA6NEQ2 426 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 H0YAE9 185 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 CYB5AP00167 134 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 CHRM2P08172 466 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 GABRB1P18505 474 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 PRKACBP22694 351 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 IER3P46695 156 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 RBP2P50120 134 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 ATP1B3P54709 279 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 RPL31P62899 125 aaKnown RBP17.61■□□□□ 0.41
CCDC78-215ENST00000538176 FIP1L1Q6UN15 594 aaKnown RBP17.61■□□□□ 0.41
CCDC78-215ENST00000538176 UTS2BQ765I0 119 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 ANGPTL5Q86XS5 388 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 MKXQ8IYA7 352 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 SYS1Q8N2H4 156 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 PIP4P2Q8N4L2 257 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 CD177Q8N6Q3 437 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 TRMT10AQ8TBZ6 339 aaKnown RBP17.61■□□□□ 0.41
CCDC78-215ENST00000538176 TNFRSF14Q92956 283 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 CEP19Q96LK0 163 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 MBOAT4Q96T53 435 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 BEX1Q9HBH7 125 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 FRRS1LQ9P0K9 344 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 HHLA2Q9UM44 414 aa17.61■□□□□ 0.41
CCDC78-215ENST00000538176 RPL36Q9Y3U8 105 aaKnown RBP17.61■□□□□ 0.41
CCDC78-215ENST00000538176 BTBD17A6NE02 478 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 RNASEK-C17orf49H0YIS7 233 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 NPFFO15130 113 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 OR12D2P58182 307 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 RAB40BQ12829 278 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 GALEQ14376 348 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 KLHL22Q53GT1 634 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 PDZD9Q8IXQ8 264 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 ENTHD1Q8IYW4 607 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 FAM185AQ8N0U4 392 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 STMN2Q93045 179 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 LGALS12Q96DT0 336 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 ZNF488Q96MN9 340 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 SLC29A1Q99808 456 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 CHIAQ9BZP6 476 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 HEXA-AS1Q9H8Q6 139 aa17.6■□□□□ 0.41
CCDC78-215ENST00000538176 J3QLW9 94 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 NDUFA7O95182 113 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 PAHP00439 452 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 TK1P04183 234 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 DBTP11182 482 aaKnown RBP17.59■□□□□ 0.41
CCDC78-215ENST00000538176 ZNF19P17023 458 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 ZNF20P17024 532 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 KIR3DL2P43630 455 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 MIDNQ504T8 468 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 GDPGP1Q6ZNW5 385 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 RDH10Q8IZV5 341 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 ZNF555Q8NEP9 628 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 SPSB1Q96BD6 273 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 C8orf4Q9NR00 106 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 MRPS18AQ9NVS2 196 aaKnown RBP17.59■□□□□ 0.41
CCDC78-215ENST00000538176 FAM118AQ9NWS6 357 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 OR14J1Q9UGF5 321 aa17.59■□□□□ 0.41
CCDC78-215ENST00000538176 K7N7A8 449 aa17.58■□□□□ 0.4
CCDC78-215ENST00000538176 TFF1P04155 84 aa17.58■□□□□ 0.4
CCDC78-215ENST00000538176 OCM2P0CE71 109 aa17.58■□□□□ 0.4
CCDC78-215ENST00000538176 OCMP0CE72 109 aaPredicted RBP17.58■□□□□ 0.4
CCDC78-215ENST00000538176 ZNF91Q05481 1191 aa17.58■□□□□ 0.4
CCDC78-215ENST00000538176 ALKBH1Q13686 389 aaKnown RBP17.58■□□□□ 0.4
CCDC78-215ENST00000538176 ZSCAN26Q16670 478 aa17.58■□□□□ 0.4
CCDC78-215ENST00000538176 LPCAT4Q643R3 524 aa17.58■□□□□ 0.4
CCDC78-215ENST00000538176 LHFPL2Q6ZUX7 228 aa17.58■□□□□ 0.4
CCDC78-215ENST00000538176 OR5R1Q8NH85 324 aa17.58■□□□□ 0.4
CCDC78-215ENST00000538176 RNF166Q96A37 237 aaPredicted RBP17.58■□□□□ 0.4
CCDC78-215ENST00000538176 C4orf36Q96KX1 117 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms