RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 AGERQ15109 404 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 COX19Q49B96 90 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 FAM27D1Q5T7N8 215 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 DEGS2Q6QHC5 323 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 OR2M3Q8NG83 312 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 OR4A4PQ8NGN8 299 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 MRGPRX1Q96LB2 322 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 FAM117AQ9C073 453 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 TRGV5A0A0B4J1U4 118 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 HRO43593 1189 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 SRFP11831 508 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 SULT1A2P50226 295 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 GFERP55789 205 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 HTRA3P83110 453 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 FUT7Q11130 342 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 SP6Q3SY56 376 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 FNDC7Q5VTL7 733 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 ETV3LQ6ZN32 361 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 LYG1Q8N1E2 194 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 OR2Z1Q8NG97 314 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 BLNKQ8WV28 456 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 MISP3Q96FF7 219 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 ERRFI1Q9UJM3 462 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-209ENST00000537178 GREB1Q4ZG55 1949 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 TRBV5-4A0A0C4DH59 114 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 CYR61O00622 381 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 FCGR3BO75015 233 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 IGHA1P01876 353 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 IGHA2P01877 340 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 AREGP15514 252 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 FGF9P31371 208 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-209ENST00000537178 LPAR6P43657 344 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 ANKRD34AQ69YU3 496 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 Q7L0L9 218 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 CCDC190Q86UF4 302 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 HSD17B10Q99714 261 aaKnown RBP9.51□□□□□ -0.89
CLIP1-209ENST00000537178 PDFQ9HBH1 243 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 PATJQ8NI35 1801 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 BRCA2P51587 3418 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 FXYD1O00168 92 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 HIST1H1DP16402 221 aaKnown RBP9.51□□□□□ -0.89
CLIP1-209ENST00000537178 CEACAM3P40198 252 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 KIR2DS2P43631 304 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 LSM11P83369 360 aaKnown RBP eCLIP9.51□□□□□ -0.89
CLIP1-209ENST00000537178 ATP6V1FQ16864 119 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 GGNBP1Q5YKI7 109 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 SPEM1Q8N4L4 309 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 OR10V1Q8NGI7 309 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 CCL4L1Q8NHW4 92 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 NT5CQ8TCD5 201 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 SIRT3Q9NTG7 399 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-209ENST00000537178 IL20Q9NYY1 176 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 TRAPPC4Q9Y296 219 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 DUXBA0A1W2PPF3 345 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 LMO7DNF2Z398 122 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 GALP22466 123 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 CEACAM6P40199 344 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 MDH2P40926 338 aaKnown RBP9.51□□□□□ -0.89
CLIP1-209ENST00000537178 CDC34P49427 236 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-209ENST00000537178 SCAND1P57086 179 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 TMPRSS11FQ6ZWK6 438 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 OR5D13Q8NGL4 314 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 OR5C1Q8NGR4 320 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 FAM210BQ96KR6 192 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 ASB1Q9Y576 335 aa9.51□□□□□ -0.89
CLIP1-209ENST00000537178 LANCL1O43813 399 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 RNPS1Q15287 305 aaKnown RBP9.5□□□□□ -0.89
CLIP1-209ENST00000537178 ETFBKMTQ8IXQ9 262 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 LILRB1Q8NHL6 650 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-209ENST00000537178 ZNF707Q96C28 371 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-209ENST00000537178 RNF2Q99496 336 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 TMEM191AQ9H0A3 160 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 GAL3ST2Q9H3Q3 398 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 SLC7A10Q9NS82 523 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 MS4A18H0YCH9 400 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 SFT2D2O95562 160 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 ONECUT2O95948 504 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 CDAP32320 146 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 RPL29P47914 159 aaKnown RBP9.5□□□□□ -0.89
CLIP1-209ENST00000537178 LIMK1P53667 647 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 HLXQ14774 488 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-209ENST00000537178 KISS1Q15726 138 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 MS4A18Q3C1V0 323 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 OTPQ5XKR4 325 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 PRSS42Q7Z5A4 293 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 TMEM179BQ7Z7N9 219 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 SPICQ8N5J4 248 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 ONECUT1Q9UBC0 465 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 MTFP1Q9UDX5 166 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 DNASE2O00115 360 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-209ENST00000537178 ADAM20O43506 726 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 PRKNO60260 465 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-209ENST00000537178 EPPINO95925 133 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 CEACAM5P06731 702 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 CST2P09228 141 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 RP1P56715 2156 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 PPP2CBP62714 309 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 PPP2CAP67775 309 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 IL13RA2Q14627 380 aa9.5□□□□□ -0.89
CLIP1-209ENST00000537178 NHLRC1Q6VVB1 395 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms