RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 FAM27D1Q5T7N8 215 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 CYB5R2Q6BCY4 276 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 NLRC3Q7RTR2 1065 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 RNF144BQ7Z419 303 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 BIVMQ86UB2 503 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 BATF2Q8N1L9 274 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 PNLDC1Q8NA58 520 aaKnown RBP18.63■□□□□ 0.57
LRRK1-208ENST00000532029 OR8B3Q8NGG8 313 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 OR51F2Q8NH61 342 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 NEIL1Q96FI4 390 aaPredicted RBP18.63■□□□□ 0.57
LRRK1-208ENST00000532029 OR8B2Q96RD0 313 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 MTCH1Q9NZJ7 389 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 CR1P17927 2039 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 FLNAP21333 2647 aaKnown RBP18.62■□□□□ 0.57
LRRK1-208ENST00000532029 MEGF11A6BM72 1044 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 ADAM20O43506 726 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 ANGPTL7O43827 346 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 ACP7Q6ZNF0 438 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 Q8IYB0 196 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 SAXO1Q8IYX7 474 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 NKAIN3Q8N8D7 197 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 LINC01356Q8N9X3 169 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 ZSCAN4Q8NAM6 433 aaPredicted RBP18.62■□□□□ 0.57
LRRK1-208ENST00000532029 OR5T2Q8NGG2 359 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 TNFAIP8L1Q8WVP5 186 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 FAM192AQ9GZU8 254 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 SMURF1Q9HCE7 757 aa18.62■□□□□ 0.57
LRRK1-208ENST00000532029 NKX6-3A6NJ46 265 aa18.61■□□□□ 0.57
LRRK1-208ENST00000532029 OR2AT4A6NND4 320 aa18.61■□□□□ 0.57
LRRK1-208ENST00000532029 FAM157AC9JC47 383 aa18.61■□□□□ 0.57
LRRK1-208ENST00000532029 F5H0A9 414 aaPredicted RBP18.61■□□□□ 0.57
LRRK1-208ENST00000532029 WNT2P09544 360 aa18.61■□□□□ 0.57
LRRK1-208ENST00000532029 SRMP19623 302 aa18.61■□□□□ 0.57
LRRK1-208ENST00000532029 GP2P55259 537 aaKnown RBP18.61■□□□□ 0.57
LRRK1-208ENST00000532029 ZP1P60852 638 aa18.61■□□□□ 0.57
LRRK1-208ENST00000532029 ERVK11-1P61568 191 aa18.61■□□□□ 0.57
LRRK1-208ENST00000532029 ESCO2Q56NI9 601 aa18.61■□□□□ 0.57
LRRK1-208ENST00000532029 STUMQ69YW2 141 aa18.61■□□□□ 0.57
LRRK1-208ENST00000532029 LYPD2Q6UXB3 125 aa18.61■□□□□ 0.57
LRRK1-208ENST00000532029 JAGN1Q8N5M9 183 aa18.61■□□□□ 0.57
LRRK1-208ENST00000532029 C1orf159Q96HA4 380 aa18.61■□□□□ 0.57
LRRK1-208ENST00000532029 TRDV1A0A1B0GX56 115 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 MAGEA13PA6NCF6 341 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 TRIM64CA6NLI5 447 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 B4DSR2 109 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 BCL3P20749 454 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 CRIP3Q6Q6R5 217 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 FIP1L1Q6UN15 594 aaKnown RBP18.6■□□□□ 0.57
LRRK1-208ENST00000532029 SLC36A1Q7Z2H8 476 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 CDH26Q8IXH8 852 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 EMG1Q92979 244 aaKnown RBP18.6■□□□□ 0.57
LRRK1-208ENST00000532029 S100A13Q99584 98 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 CCL13Q99616 98 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 SMR3AQ99954 134 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 HES4Q9HCC6 221 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 EXOSC4Q9NPD3 245 aaKnown RBP18.6■□□□□ 0.57
LRRK1-208ENST00000532029 STUB1Q9UNE7 303 aa18.6■□□□□ 0.57
LRRK1-208ENST00000532029 VPS13CQ709C8 3753 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 TNFRSF13BO14836 293 aaPredicted RBP18.59■□□□□ 0.57
LRRK1-208ENST00000532029 TMPRSS2O15393 492 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 FOXH1O75593 365 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 KDM4BO94953 1096 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 PSG2P11465 335 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 ZNF16P17020 682 aaPredicted RBP18.59■□□□□ 0.57
LRRK1-208ENST00000532029 GALP22466 123 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 CALRP27797 417 aaKnown RBP18.59■□□□□ 0.57
LRRK1-208ENST00000532029 GABRA2P47869 451 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 OR3A4PP47883 348 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 NPBWR2P48146 333 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 PITPNBP48739 271 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 CD200R1LQ6Q8B3 271 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 CLEC9AQ6UXN8 241 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 PXT1Q8NFP0 134 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 MSI2Q96DH6 328 aaKnown RBP18.59■□□□□ 0.57
LRRK1-208ENST00000532029 NKX3-1Q99801 234 aaPredicted RBP18.59■□□□□ 0.57
LRRK1-208ENST00000532029 DNTTIP1Q9H147 329 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 PPIL3Q9H2H8 161 aaKnown RBP18.59■□□□□ 0.57
LRRK1-208ENST00000532029 ELL3Q9HB65 397 aaPredicted RBP18.59■□□□□ 0.57
LRRK1-208ENST00000532029 LPAR2Q9HBW0 351 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 RBFOX1Q9NWB1 397 aaKnown RBP18.59■□□□□ 0.57
LRRK1-208ENST00000532029 KAAG1Q9UBP8 84 aa18.59■□□□□ 0.57
LRRK1-208ENST00000532029 IGKV1-12A0A0C4DH73 117 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 F8VVB4 439 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 F8VWA3 439 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 CD5LO43866 347 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 LY6G6DO95868 133 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 KNG1P01042 644 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 TGFAP01135 160 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 IGKV1D-12P01611 117 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 CD36P16671 472 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 JUNBP17275 347 aaPredicted RBP18.58■□□□□ 0.56
LRRK1-208ENST00000532029 PTGFRP43088 359 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 GNB2P62879 340 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 ATPAF1Q5TC12 328 aaPredicted RBP18.58■□□□□ 0.56
LRRK1-208ENST00000532029 GLT8D1Q68CQ7 371 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 LRRTM1Q86UE6 522 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 FAM58AQ8N1B3 248 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 ANGPTL6Q8NI99 470 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 MED30Q96HR3 178 aa18.58■□□□□ 0.56
LRRK1-208ENST00000532029 SSBP3Q9BWW4 388 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms