RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 SLC25A35Q3KQZ1 300 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 GUSBP11Q6P575 273 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 CLEC19AQ6UXS0 136 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 PLCZ1Q86YW0 608 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 BBS7Q8IWZ6 715 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 OR4M2Q8NGB6 313 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 OR4K2Q8NGD2 314 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 OR1L1Q8NH94 360 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 BLNKQ8WV28 456 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 HGDQ93099 445 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 NARS2Q96I59 477 aaKnown RBP2.84□□□□□ -1.95
USP47-211ENST00000531513 SMIM8Q96KF7 97 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 QKIQ96PU8 341 aaKnown RBP eCLIP2.84□□□□□ -1.95
USP47-211ENST00000531513 IMP3Q9NV31 184 aaKnown RBP2.84□□□□□ -1.95
USP47-211ENST00000531513 UBAP1Q9NZ09 502 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 FBXL3Q9UKT7 428 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 RAB22AQ9UL26 194 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 ENPP4Q9Y6X5 453 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 ELP1O95163 1332 aa2.84□□□□□ -1.96
USP47-211ENST00000531513 MTCL1Q9Y4B5 1905 aaKnown RBP2.83□□□□□ -1.96
USP47-211ENST00000531513 PIKFYVEQ9Y2I7 2098 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 CDC42BPBQ9Y5S2 1711 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 TMEM223A0PJW6 202 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 GOLGA6L10A6NI86 522 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 OR2AT4A6NND4 320 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 PRAMEF26H0Y7S4 382 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 RLN2P04090 185 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 ZNF35P13682 527 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 MDKP21741 143 aaPredicted RBP2.83□□□□□ -1.96
USP47-211ENST00000531513 IL3RAP26951 378 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 PRSS3P35030 304 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 TTPAP49638 278 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 PMVKQ15126 192 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 SHHQ15465 462 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 C2orf83Q53S99 150 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 RNASE13Q5GAN3 156 aaKnown RBP2.83□□□□□ -1.96
USP47-211ENST00000531513 TIMM23BQ5SRD1 257 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 SAXO2Q658L1 398 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 LINC01551Q86U37 167 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 RNF10Q8N5U6 811 aaKnown RBP2.83□□□□□ -1.96
USP47-211ENST00000531513 CCNYL1Q8N7R7 359 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 ATP6V1C2Q8NEY4 427 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 ACTL9Q8TC94 416 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 DYNC2LI1Q8TCX1 351 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 S100PBPQ96BU1 408 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 CYYR1Q96J86 154 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 OR10C1Q96KK4 312 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 SPACA5Q96QH8 159 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 PLA2G2FQ9BZM2 168 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 ING2Q9H160 280 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 LHX5Q9H2C1 402 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 PLEKHF2Q9H8W4 249 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 EXOSC4Q9NPD3 245 aaKnown RBP2.83□□□□□ -1.96
USP47-211ENST00000531513 ZNF355PQ9NSJ1 428 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 TBX21Q9UL17 535 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 LRRC42Q9Y546 428 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 TMEM14AQ9Y6G1 99 aa2.83□□□□□ -1.96
USP47-211ENST00000531513 ZNF646O15015 1829 aaPredicted RBP2.82□□□□□ -1.96
USP47-211ENST00000531513 IGHV7-4-1A0A0J9YVY3 117 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 C9J4A7 227 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 KLRC4-KLRK1H3BQV0 150 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 J3QLI3 93 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 ZNF207O43670 478 aaKnown RBP2.82□□□□□ -1.96
USP47-211ENST00000531513 FOXH1O75593 365 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 CRTAPO75718 401 aaPredicted RBP2.82□□□□□ -1.96
USP47-211ENST00000531513 GATBO75879 557 aaKnown RBP2.82□□□□□ -1.96
USP47-211ENST00000531513 RAB36O95755 333 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 LIMS3P0CW19 117 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 LIMS4P0CW20 117 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 PET100P0DJ07 73 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 GCLMP48507 274 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 ZNF133P52736 654 aaPredicted RBP2.82□□□□□ -1.96
USP47-211ENST00000531513 EMP2P54851 167 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 PPP1CAP62136 330 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 RPL10AP62906 217 aaKnown RBP2.82□□□□□ -1.96
USP47-211ENST00000531513 GRB2P62993 217 aaKnown RBP2.82□□□□□ -1.96
USP47-211ENST00000531513 UBE2IP63279 158 aaKnown RBP2.82□□□□□ -1.96
USP47-211ENST00000531513 PITPNAQ00169 270 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 BAXQ07812 192 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 ADIGQ0VDE8 80 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 ZNF658BQ4V348 819 aaPredicted RBP2.82□□□□□ -1.96
USP47-211ENST00000531513 YIF1BQ5BJH7 314 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 USP50Q70EL3 339 aaPredicted RBP2.82□□□□□ -1.96
USP47-211ENST00000531513 WDR86Q86TI4 376 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 FUNDC1Q8IVP5 155 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 CYP4Z2PQ8N1L4 340 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 TMEM256Q8N2U0 113 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 Q8N7P7 452 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 TTLQ8NG68 377 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 OR2M7Q8NG81 312 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 PPWD1Q96BP3 646 aaKnown RBP2.82□□□□□ -1.96
USP47-211ENST00000531513 WDR34Q96EX3 536 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 C8orf76Q96K31 380 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 BIRC8Q96P09 236 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 PITX2Q99697 317 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 NDFIP1Q9BT67 221 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 ZNF426Q9BUY5 554 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 NUDT9Q9BW91 350 aa2.82□□□□□ -1.96
USP47-211ENST00000531513 RBM22Q9NW64 420 aaKnown RBP eCLIP2.82□□□□□ -1.96
USP47-211ENST00000531513 IGLV4-69A0A075B6H9 119 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms