RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CALML5Q9NZT1 146 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 VPS29Q9UBQ0 182 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 GHRLQ9UBU3 117 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 PRODH2Q9UF12 536 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 LGALS13Q9UHV8 139 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 CD84Q9UIB8 345 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF223Q9UK11 482 aaPredicted RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 KLK12Q9UKR0 248 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 UBQLN1Q9UMX0 589 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 RPL26L1Q9UNX3 145 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ASF1AQ9Y294 204 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 SLC17A4Q9Y2C5 497 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 SLC35A3Q9Y2D2 325 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 YARS2Q9Y2Z4 477 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 RPL36Q9Y3U8 105 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 RNF115Q9Y4L5 304 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 RBM7Q9Y580 266 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 OR1A2Q9Y585 309 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 SNX10Q9Y5X0 201 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 MROH7Q68CQ1 1323 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ABCC12Q96J65 1359 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 UACAQ9BZF9 1416 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 SETD5Q9C0A6 1442 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 A0A0A6YYD5 115 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 GLYATL1P3A0A0U1RQE8 302 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 IGSF23A1L1A6 192 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 F5H6K3 240 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 C15orf65H3BRN8 121 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 K7ERI5 159 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 SYNGR1O43759 233 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 ORC5O43913 435 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 UGT2B11O75310 529 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 SPAG7O75391 227 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 CNMDO75829 334 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 ANXA9O76027 345 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 DIRAS1O95057 198 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 CD160O95971 181 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 HAND1O96004 215 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 JCHAINP01591 159 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 C1QBP02746 253 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 MMP1P03956 469 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 ATP5A1P25705 553 aaKnown RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 DDTP30046 118 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 FGF9P31371 208 aaPredicted RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 HPCAL1P37235 193 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 HTR5AP47898 357 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 CDKN2DP55273 166 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 DLX6P56179 175 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 PIGPP57054 158 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 RAB8AP61006 207 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 RPL26P61254 145 aaKnown RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 PPP3R1P63098 170 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 EMX1Q04741 257 aaPredicted RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 SKP2Q13309 424 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 OR2F1Q13607 317 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 PMVKQ15126 192 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 CDK10Q15131 360 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 SURF2Q15527 256 aaPredicted RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 OR1Q1Q15612 314 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 NSDHLQ15738 373 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 TAL2Q16559 108 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 SNRNP35Q16560 246 aaKnown RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 TBC1D28Q2M2D7 210 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 RPEL1Q2QD12 228 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 PLPPR5Q32ZL2 321 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 SOHLH1Q5JUK2 328 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 ACTL10Q5JWF8 245 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 STEAP4Q687X5 459 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 CDC42EP5Q6NZY7 148 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 DCUN1D2Q6PH85 259 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 ENPP6Q6UWR7 440 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 TMEM184AQ6ZMB5 413 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 MBOAT2Q6ZWT7 520 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 ANKRD37Q7Z713 158 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 GALNT10Q86SR1 603 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 APOBEC3FQ8IUX4 373 aaKnown RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 SLC30A8Q8IWU4 369 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 SLC35F2Q8IXU6 374 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 KIR3DL3Q8N743 410 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 LRRC52Q8N7C0 313 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 OR4D9Q8NGE8 314 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 OR56A4Q8NGH8 313 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 OR1P1Q8NH06 330 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 OR4C6Q8NH72 309 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 OR56B4Q8NH76 319 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 PLPPR1Q8TBJ4 325 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 TBCKQ8TEA7 893 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 IL22RA2Q969J5 263 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 UBE2E3Q969T4 207 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 UPRTQ96BW1 309 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 RPUSD4Q96CM3 377 aaKnown RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 RCN3Q96D15 328 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 CMBLQ96DG6 245 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 SMARCD1Q96GM5 515 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF641Q96N77 438 aaPredicted RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 OR8B4Q96RC9 309 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 DOK1Q99704 481 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 RIOK2Q9BVS4 552 aaKnown RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 MS4A8Q9BY19 250 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 OR11A1Q9GZK7 315 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms