RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 CALHM1Q8IU99 346 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 BATF2Q8N1L9 274 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 CD177Q8N6Q3 437 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 OR4F5Q8NH21 305 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 DYRK2Q92630 601 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 UBE2FQ969M7 185 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 C10orf35Q96D05 121 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 MBOAT4Q96T53 435 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 DPAGT1Q9H3H5 408 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 HES4Q9HCC6 221 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 OR14J1Q9UGF5 321 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 GMPPBQ9Y5P6 360 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 A0A1B0GUS0 222 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 A0A1W2PRD5 423 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 A0A1W2PRF3 423 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 A0A1W2PRM7 423 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 H0YAE9 185 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 SLC16A6O15403 523 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 KNG1P01042 644 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 SAA4P35542 130 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 IER3P46695 156 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 CEBPDP49716 269 aaPredicted RBP10.91□□□□□ -0.66
VPS28-211ENST00000530790 FUT6P51993 359 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 RPL31P62899 125 aaKnown RBP10.91□□□□□ -0.66
VPS28-211ENST00000530790 UBE2V2Q15819 145 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 TMEM244Q5VVB8 128 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 OR5D13Q8NGL4 314 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 OR2G2Q8NGZ5 317 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 PP6455Q8WZ26 134 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 TNFRSF14Q92956 283 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 BORCS8Q96FH0 119 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 MRPL48Q96GC5 212 aaKnown RBP10.91□□□□□ -0.66
VPS28-211ENST00000530790 CEP19Q96LK0 163 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 MYCBPQ99417 103 aaPredicted RBP10.91□□□□□ -0.66
VPS28-211ENST00000530790 BEX1Q9HBH7 125 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 C19orf12Q9NSK7 152 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 C1RLQ9NZP8 487 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 ZNRD1Q9P1U0 126 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 MMP24Q9Y5R2 645 aa10.91□□□□□ -0.66
VPS28-211ENST00000530790 MEIOCA2RUB1 952 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 E9PQ18 207 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 J3QRE1 110 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 SPRY1O43609 319 aaPredicted RBP10.9□□□□□ -0.66
VPS28-211ENST00000530790 ANGPTL7O43827 346 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 MPZL2O60487 215 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 NDUFA7O95182 113 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 HTR1AP08908 422 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 ZNF20P17024 532 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 UBE2E1P51965 193 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 OR12D2P58182 307 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 ERVK11-1P61568 191 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 ZNF91Q05481 1191 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 ACSM1Q08AH1 577 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 GDPGP1Q6ZNW5 385 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 RDH10Q8IZV5 341 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 ACBD7Q8N6N7 88 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 ASCC1Q8N9N2 400 aaKnown RBP10.9□□□□□ -0.66
VPS28-211ENST00000530790 SLAMF9Q96A28 289 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 C4orf36Q96KX1 117 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 FAM234AQ9H0X4 552 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 SLITRK2Q9H156 845 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 S100A14Q9HCY8 104 aa10.9□□□□□ -0.66
VPS28-211ENST00000530790 IGKV1-27A0A075B6S5 117 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 hCG_1809904A0A1W2PP81 198 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 A0A1W2PPE2 198 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 A0A1W2PR64 198 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 A0A1W2PRV1 198 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 J3QLW9 94 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 GPR137BO60478 399 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 TK1P04183 234 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 ISG15P05161 165 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 DBTP11182 482 aaKnown RBP10.89□□□□□ -0.67
VPS28-211ENST00000530790 ZNF19P17023 458 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 RELBQ01201 579 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 FDX2Q6P4F2 183 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 C17orf107Q6ZR85 190 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 ZBTB49Q6ZSB9 765 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 SLC25A26Q70HW3 274 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 Q8IYB0 196 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 ENTHD1Q8IYW4 607 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 PQLC1Q8N2U9 271 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 PNKDQ8N490 385 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 DNAAF1Q8NEP3 725 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 OR4M1Q8NGD0 313 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 WFDC12Q8WWY7 111 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 EMG1Q92979 244 aaKnown RBP10.89□□□□□ -0.67
VPS28-211ENST00000530790 RNF166Q96A37 237 aaPredicted RBP10.89□□□□□ -0.67
VPS28-211ENST00000530790 LGALS12Q96DT0 336 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 ADAT3Q96EY9 351 aaPredicted RBP10.89□□□□□ -0.67
VPS28-211ENST00000530790 Q96MT0 163 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 FRRS1LQ9P0K9 344 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 AASSQ9UDR5 926 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 VPREB3Q9UKI3 123 aa10.89□□□□□ -0.67
VPS28-211ENST00000530790 EXOGQ9Y2C4 368 aaKnown RBP10.89□□□□□ -0.67
VPS28-211ENST00000530790 SF3B6Q9Y3B4 125 aaKnown RBP10.89□□□□□ -0.67
VPS28-211ENST00000530790 INMTO95050 263 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 CYB5AP00167 134 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 CHRM2P08172 466 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 OCM2P0CE71 109 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 OCMP0CE72 109 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms