RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 PIGLQ9Y2B2 252 aa12.96□□□□□ -0.33
PTPRU-210ENST00000527027 J3QT63 122 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 K7EIL1 84 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 NXPH2O95156 264 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 IGLV3-1P01715 115 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 ALDOBP05062 364 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 PIPP12273 146 aaPredicted RBP12.95□□□□□ -0.34
PTPRU-210ENST00000527027 VDAC2P45880 294 aaPredicted RBP12.95□□□□□ -0.34
PTPRU-210ENST00000527027 HAAOP46952 286 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 HCCSP53701 268 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 GINS1Q14691 196 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 SLC35D3Q5M8T2 416 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 ZNF626Q68DY1 528 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 KCTD18Q6PI47 426 aaPredicted RBP12.95□□□□□ -0.34
PTPRU-210ENST00000527027 CPOQ8IVL8 374 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 OR5AU1Q8NGC0 362 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 OR51E1Q8TCB6 317 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 TEAD3Q99594 435 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 OCSTAMPQ9BR26 566 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 THTPAQ9BU02 230 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 PBOV1Q9GZY1 135 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 OR14J1Q9UGF5 321 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 POLDIP2Q9Y2S7 368 aa12.95□□□□□ -0.34
PTPRU-210ENST00000527027 A0A1W2PRX2 142 aa12.94□□□□□ -0.34
PTPRU-210ENST00000527027 K7N7A8 449 aa12.94□□□□□ -0.34
PTPRU-210ENST00000527027 RBP4P02753 201 aa12.94□□□□□ -0.34
PTPRU-210ENST00000527027 ZNF728P0DKX0 622 aa12.94□□□□□ -0.34
PTPRU-210ENST00000527027 OR12D2P58182 307 aa12.94□□□□□ -0.34
PTPRU-210ENST00000527027 DYNC1I2Q13409 638 aaKnown RBP12.94□□□□□ -0.34
PTPRU-210ENST00000527027 TMEM95Q3KNT9 176 aa12.94□□□□□ -0.34
PTPRU-210ENST00000527027 DEFB121Q5J5C9 76 aa12.94□□□□□ -0.34
PTPRU-210ENST00000527027 LCN1P1Q5VSP4 162 aa12.94□□□□□ -0.34
PTPRU-210ENST00000527027 GIPC3Q8TF64 312 aa12.94□□□□□ -0.34
PTPRU-210ENST00000527027 MROQ9BYG7 248 aa12.94□□□□□ -0.34
PTPRU-210ENST00000527027 YIPF3Q9GZM5 350 aa12.94□□□□□ -0.34
PTPRU-210ENST00000527027 HES4Q9HCC6 221 aa12.94□□□□□ -0.34
PTPRU-210ENST00000527027 PQLC2LA1A4F0 135 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 H3BUI4 141 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 PSMD9O00233 223 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 F2RL2O00254 374 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 ZNF254O75437 659 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 HMGN1P05114 100 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 IGHV1-8P0DP01 117 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 PF4V1P10720 104 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 RPS7P62081 194 aaKnown RBP12.93□□□□□ -0.34
PTPRU-210ENST00000527027 GK3PQ14409 553 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 FAM98BQ52LJ0 330 aaKnown RBP12.93□□□□□ -0.34
PTPRU-210ENST00000527027 CLVS2Q5SYC1 327 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 C11orf87Q6NUJ2 197 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 ASRGL1Q7L266 308 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 C10orf67Q8IYJ2 551 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 NUFIP1Q9UHK0 495 aaKnown RBP12.93□□□□□ -0.34
PTPRU-210ENST00000527027 HILPDAQ9Y5L2 63 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 RYR3Q15413 4870 aa12.93□□□□□ -0.34
PTPRU-210ENST00000527027 FAM90A22PA8MWA6 464 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 DLGAP1O14490 977 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 CIB2O75838 187 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 DHRS3O75911 302 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 JUNBP17275 347 aaPredicted RBP12.92□□□□□ -0.34
PTPRU-210ENST00000527027 HOXB6P17509 224 aaKnown RBP12.92□□□□□ -0.34
PTPRU-210ENST00000527027 AZGP1P25311 298 aaKnown RBP12.92□□□□□ -0.34
PTPRU-210ENST00000527027 ERVK11-1P61568 191 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 SLC35A2P78381 396 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 ROM1Q03395 351 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 COL10A1Q03692 680 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 SLC34A1Q06495 639 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 TRIM25Q14258 630 aaKnown RBP12.92□□□□□ -0.34
PTPRU-210ENST00000527027 MINOS1Q5TGZ0 78 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 TMEM42Q69YG0 159 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 CENPVQ7Z7K6 275 aaPredicted RBP12.92□□□□□ -0.34
PTPRU-210ENST00000527027 ZNF679Q8IYX0 411 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 BATF2Q8N1L9 274 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 ASCC1Q8N9N2 400 aaKnown RBP12.92□□□□□ -0.34
PTPRU-210ENST00000527027 BBS1Q8NFJ9 593 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 ASB9Q96DX5 294 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 RCC1LQ96I51 464 aaKnown RBP12.92□□□□□ -0.34
PTPRU-210ENST00000527027 CADM1Q9BY67 442 aaKnown RBP12.92□□□□□ -0.34
PTPRU-210ENST00000527027 GPR173Q9NS66 373 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 SLC22A13Q9Y226 551 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 MINOS1-NBL1R4GNA1 71 aa12.92□□□□□ -0.34
PTPRU-210ENST00000527027 DNAH9Q9NYC9 4486 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 TCRBV4S1A1TA0A5B7 111 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 MEX3AA1L020 520 aaKnown RBP12.91□□□□□ -0.34
PTPRU-210ENST00000527027 ARRDC5A6NEK1 342 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 DUS4LO95620 317 aaKnown RBP12.91□□□□□ -0.34
PTPRU-210ENST00000527027 PF4P02776 101 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 CHRM2P08172 466 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 VSIG8P0DPA2 414 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 SLC2A5P22732 501 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 MPZP25189 248 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 EDDM3BP56851 147 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 CDK5Q00535 292 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 ZNF829Q3KNS6 432 aaPredicted RBP12.91□□□□□ -0.34
PTPRU-210ENST00000527027 TCTEX1D4Q5JR98 221 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 GDPD3Q7L5L3 318 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 DHFR2Q86XF0 187 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 LRGUKQ96M69 825 aa12.91□□□□□ -0.34
PTPRU-210ENST00000527027 TSSC4Q9Y5U2 329 aaPredicted RBP12.91□□□□□ -0.34
PTPRU-210ENST00000527027 WI2-2373I1.2A0A1W2PRP0 233 aa12.9□□□□□ -0.34
PTPRU-210ENST00000527027 ZNF737O75373 536 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms