RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 JMJD7P0C870 316 aa15.24■□□□□ 0.03
USH1C-205ENST00000527020 PCBD1P61457 104 aa15.24■□□□□ 0.03
USH1C-205ENST00000527020 OR8B8Q15620 311 aa15.24■□□□□ 0.03
USH1C-205ENST00000527020 PRSS54Q6PEW0 395 aa15.24■□□□□ 0.03
USH1C-205ENST00000527020 OR2M7Q8NG81 312 aa15.24■□□□□ 0.03
USH1C-205ENST00000527020 HES7Q9BYE0 225 aa15.24■□□□□ 0.03
USH1C-205ENST00000527020 ZNF703Q9H7S9 590 aaPredicted RBP15.24■□□□□ 0.03
USH1C-205ENST00000527020 BOKQ9UMX3 212 aaPredicted RBP15.24■□□□□ 0.03
USH1C-205ENST00000527020 IGKV3D-15A0A087WSY6 115 aa15.23■□□□□ 0.03
USH1C-205ENST00000527020 LHX2P50458 406 aa15.23■□□□□ 0.03
USH1C-205ENST00000527020 PIGYQ3MUY2 71 aa15.23■□□□□ 0.03
USH1C-205ENST00000527020 PABPC1L2AQ5JQF8 200 aa15.23■□□□□ 0.03
USH1C-205ENST00000527020 ELP2Q6IA86 826 aa15.23■□□□□ 0.03
USH1C-205ENST00000527020 OR51F2Q8NH61 342 aa15.23■□□□□ 0.03
USH1C-205ENST00000527020 DYRK2Q92630 601 aa15.23■□□□□ 0.03
USH1C-205ENST00000527020 CPNE2Q96FN4 548 aaPredicted RBP15.23■□□□□ 0.03
USH1C-205ENST00000527020 RGCCQ9H4X1 137 aa15.23■□□□□ 0.03
USH1C-205ENST00000527020 METTL8Q9H825 291 aaKnown RBP15.23■□□□□ 0.03
USH1C-205ENST00000527020 CELSR3Q9NYQ7 3312 aa15.23■□□□□ 0.03
USH1C-205ENST00000527020 LNP1A1A4G5 178 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 GEMIN2O14893 280 aaKnown RBP15.22■□□□□ 0.03
USH1C-205ENST00000527020 OPRM1P35372 400 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 RAB32Q13637 225 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 OR10AD1Q8NGE0 317 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 EDARQ9UNE0 448 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 C14orf166Q9Y224 244 aaKnown RBP15.22■□□□□ 0.03
USH1C-205ENST00000527020 MED13Q9UHV7 2174 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 A0A1B0GW55 424 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 CTSDP07339 412 aaPredicted RBP15.22■□□□□ 0.03
USH1C-205ENST00000527020 SFTPBP07988 381 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 FCGR3AP08637 254 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 HOXB5P09067 269 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 DUX4L2P0CJ85 424 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 DUX4L3P0CJ86 424 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 DUX4L4P0CJ87 422 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 DUX4L5P0CJ88 424 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 DUX4L6P0CJ89 424 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 DUX4L7P0CJ90 424 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 DAZAP2Q15038 168 aaPredicted RBP15.22■□□□□ 0.03
USH1C-205ENST00000527020 CDCP2Q5VXM1 449 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 BRICD5Q6PL45 260 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 ZBTB44Q8NCP5 570 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 NAXEQ8NCW5 288 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 SLC30A7Q8NEW0 376 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 SPSB4Q96A44 273 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 FAM173AQ9BQD7 235 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 C1QTNF5Q9BXJ0 243 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 DUX4Q9UBX2 424 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 GPR179Q6PRD1 2367 aa15.22■□□□□ 0.03
USH1C-205ENST00000527020 FGF16O43320 207 aa15.21■□□□□ 0.03
USH1C-205ENST00000527020 IFNA2P01563 188 aa15.21■□□□□ 0.03
USH1C-205ENST00000527020 OR5H8P0DN80 308 aa15.21■□□□□ 0.03
USH1C-205ENST00000527020 DTYMKP23919 212 aa15.21■□□□□ 0.03
USH1C-205ENST00000527020 CLDN18P56856 261 aa15.21■□□□□ 0.03
USH1C-205ENST00000527020 NAAAQ02083 359 aa15.21■□□□□ 0.03
USH1C-205ENST00000527020 PDZK1IP1Q13113 114 aa15.21■□□□□ 0.03
USH1C-205ENST00000527020 BTN1A1Q13410 526 aa15.21■□□□□ 0.03
USH1C-205ENST00000527020 RBM39Q14498 530 aaKnown RBP15.21■□□□□ 0.03
USH1C-205ENST00000527020 FBXL14Q8N1E6 418 aa15.21■□□□□ 0.03
USH1C-205ENST00000527020 MARS2Q96GW9 593 aaKnown RBP15.21■□□□□ 0.03
USH1C-205ENST00000527020 CMSS1Q9BQ75 279 aaKnown RBP15.21■□□□□ 0.03
USH1C-205ENST00000527020 SLC7A10Q9NS82 523 aa15.21■□□□□ 0.03
USH1C-205ENST00000527020 IL36GQ9NZH8 169 aa15.21■□□□□ 0.03
USH1C-205ENST00000527020 NOSIPQ9Y314 301 aaKnown RBP15.21■□□□□ 0.03
USH1C-205ENST00000527020 ZNF407Q9C0G0 2248 aa15.21■□□□□ 0.02
USH1C-205ENST00000527020 ECI1P42126 302 aa15.21■□□□□ 0.02
USH1C-205ENST00000527020 FUT6P51993 359 aa15.21■□□□□ 0.02
USH1C-205ENST00000527020 SRYQ05066 204 aa15.21■□□□□ 0.02
USH1C-205ENST00000527020 PDSS1Q5T2R2 415 aa15.21■□□□□ 0.02
USH1C-205ENST00000527020 TFAP2EQ6VUC0 442 aa15.21■□□□□ 0.02
USH1C-205ENST00000527020 Q6ZPA2 131 aa15.21■□□□□ 0.02
USH1C-205ENST00000527020 COLCA1Q6ZS62 124 aa15.21■□□□□ 0.02
USH1C-205ENST00000527020 OSR2Q8N2R0 312 aa15.21■□□□□ 0.02
USH1C-205ENST00000527020 AQP10Q96PS8 301 aa15.21■□□□□ 0.02
USH1C-205ENST00000527020 ACKR4Q9NPB9 350 aa15.21■□□□□ 0.02
USH1C-205ENST00000527020 TAS2R3Q9NYW6 316 aa15.21■□□□□ 0.02
USH1C-205ENST00000527020 CRYM-AS1A6NIL9 109 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 LINC01387J3KSC0 135 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 SIGLEC5O15389 551 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 ZNF205O95201 554 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 NRN1LQ496H8 165 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 PXDC1Q5TGL8 231 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 PLCXD3Q63HM9 321 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 OR1S2Q8NGQ3 325 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 PIGCQ92535 297 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 LINC00470Q9BZP3 86 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 PRDM14Q9GZV8 571 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 PCDHB10Q9UN67 800 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 DNAJC13O75165 2243 aa15.2■□□□□ 0.02
USH1C-205ENST00000527020 ZNF816-ZNF321PA0A0X1KG74 233 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 XRCC2O43543 280 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 MRPL33O75394 65 aaKnown RBP15.19■□□□□ 0.02
USH1C-205ENST00000527020 TPT1P13693 172 aaKnown RBP15.19■□□□□ 0.02
USH1C-205ENST00000527020 FOXG1P55316 489 aaPredicted RBP15.19■□□□□ 0.02
USH1C-205ENST00000527020 ARF1P84077 181 aaKnown RBP15.19■□□□□ 0.02
USH1C-205ENST00000527020 ATRAIDQ6UW56 229 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 DHRS11Q6UWP2 260 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 CALHM1Q8IU99 346 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 BAP18Q8IXM2 172 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 BPIFCQ8NFQ6 507 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms