RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 LHX6Q9UPM6 363 aa13.14□□□□□ -0.31
BEST1-204ENST00000524926 CRYABP02511 175 aaKnown RBP13.13□□□□□ -0.31
BEST1-204ENST00000524926 PPA1Q15181 289 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 VAX1Q5SQQ9 334 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 RPUSD3Q6P087 351 aaKnown RBP13.13□□□□□ -0.31
BEST1-204ENST00000524926 C11orf88Q6PI97 169 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 INO80CQ6PI98 192 aaPredicted RBP13.13□□□□□ -0.31
BEST1-204ENST00000524926 ZDHHC22Q8N966 263 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 ZSCAN4Q8NAM6 433 aaPredicted RBP13.13□□□□□ -0.31
BEST1-204ENST00000524926 TERB2Q8NHR7 220 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 GRPEL2Q8TAA5 225 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 EMG1Q92979 244 aaKnown RBP13.13□□□□□ -0.31
BEST1-204ENST00000524926 FIGNL2A6NMB9 653 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 GOSR2O14653 212 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 LILRA1O75019 489 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 CA11O75493 328 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 SIX6O95475 246 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 C2orf68Q2NKX9 166 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 CHRFAM7AQ494W8 412 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 ZNF610Q8N9Z0 462 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 OR10AD1Q8NGE0 317 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 OR5A2Q8NGI9 324 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 MARCH1Q8TCQ1 289 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 SLAMF9Q96A28 289 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 HSF4Q9ULV5 492 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 PROCRQ9UNN8 238 aa13.13□□□□□ -0.31
BEST1-204ENST00000524926 SDCBPO00560 298 aaPredicted RBP13.12□□□□□ -0.31
BEST1-204ENST00000524926 RGS13O14921 159 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 TNFSF13O75888 250 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 AGFG2O95081 481 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 HLA-AP01891 365 aaKnown RBP13.12□□□□□ -0.31
BEST1-204ENST00000524926 TAS2R46P59540 309 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 DHRS2Q13268 280 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 C9orf62Q8N4C0 152 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 ARRDC1Q8N5I2 433 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 ABHD17AQ96GS6 310 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 GPR137Q96N19 417 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 OPN3Q9H1Y3 402 aaPredicted RBP13.12□□□□□ -0.31
BEST1-204ENST00000524926 MYOZ1Q9NP98 299 aaPredicted RBP13.12□□□□□ -0.31
BEST1-204ENST00000524926 PIPOXQ9P0Z9 390 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 AK3Q9UIJ7 227 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 H3BUI4 141 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 SLC22A5O76082 557 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 GIPP09681 153 aaPredicted RBP13.12□□□□□ -0.31
BEST1-204ENST00000524926 AKR1C4P17516 323 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 COX5AP20674 150 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 CHATP28329 748 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 NHLH1Q02575 133 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 SEM1Q6ZVN7 128 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 SLC25A42Q86VD7 318 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 C12orf45Q8N5I9 185 aaPredicted RBP13.12□□□□□ -0.31
BEST1-204ENST00000524926 OR5AP2Q8NGF4 316 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 STARD4Q96DR4 205 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 CMSS1Q9BQ75 279 aaKnown RBP13.12□□□□□ -0.31
BEST1-204ENST00000524926 SULT4A1Q9BR01 284 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 SLA2Q9H6Q3 261 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 EHFQ9NZC4 300 aa13.12□□□□□ -0.31
BEST1-204ENST00000524926 INTS1Q8N201 2190 aaKnown RBP13.11□□□□□ -0.31
BEST1-204ENST00000524926 GFRA3O60609 400 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 SMPD2O60906 423 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 OR7C1O76099 320 aaPredicted RBP13.11□□□□□ -0.31
BEST1-204ENST00000524926 HOXB1P14653 301 aaPredicted RBP13.11□□□□□ -0.31
BEST1-204ENST00000524926 BCL3P20749 454 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 CA6P23280 308 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 NPY4RP50391 375 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 RBM11P57052 281 aaKnown RBP13.11□□□□□ -0.31
BEST1-204ENST00000524926 PPP1CBP62140 327 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 TMEM17Q86X19 198 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 CXorf67Q86X51 503 aaPredicted RBP13.11□□□□□ -0.31
BEST1-204ENST00000524926 SPACA3Q8IXA5 215 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 OR5P3Q8WZ94 311 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 WDR89Q96FK6 387 aaPredicted RBP13.11□□□□□ -0.31
BEST1-204ENST00000524926 OR2J1Q9GZK6 312 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 MPC1Q9Y5U8 109 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 DMXL2Q8TDJ6 3036 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 MBD3L4A6NDZ8 208 aaPredicted RBP13.11□□□□□ -0.31
BEST1-204ENST00000524926 MBD3L3A6NE82 208 aaPredicted RBP13.11□□□□□ -0.31
BEST1-204ENST00000524926 MBD3L5A6NJ08 208 aaPredicted RBP13.11□□□□□ -0.31
BEST1-204ENST00000524926 TSC22D2O75157 780 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 OR2A4O95047 310 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 GSTT2P0CG29 244 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 H2BFSP57053 126 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 RAP2BP61225 183 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 ADAD2Q8NCV1 583 aaKnown RBP13.11□□□□□ -0.31
BEST1-204ENST00000524926 MBD3L2Q8NHZ7 208 aaPredicted RBP13.11□□□□□ -0.31
BEST1-204ENST00000524926 DYRK2Q92630 601 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 OR2A7Q96R45 310 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 PPA2Q9H2U2 334 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 FN3KRPQ9HA64 309 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 APC2O95996 2303 aa13.11□□□□□ -0.31
BEST1-204ENST00000524926 IGKV1D-8A0A087WSZ0 117 aa13.1□□□□□ -0.31
BEST1-204ENST00000524926 WDR1O75083 606 aa13.1□□□□□ -0.31
BEST1-204ENST00000524926 CBR1P16152 277 aa13.1□□□□□ -0.31
BEST1-204ENST00000524926 VAMP1P23763 118 aa13.1□□□□□ -0.31
BEST1-204ENST00000524926 ERVS71-1P61550 626 aa13.1□□□□□ -0.31
BEST1-204ENST00000524926 PPP1R1AQ13522 171 aa13.1□□□□□ -0.31
BEST1-204ENST00000524926 HAGHLQ6PII5 290 aaPredicted RBP13.1□□□□□ -0.31
BEST1-204ENST00000524926 C3P1Q6ZMU1 363 aa13.1□□□□□ -0.31
BEST1-204ENST00000524926 MKXQ8IYA7 352 aa13.1□□□□□ -0.31
BEST1-204ENST00000524926 WDR31Q8NA23 367 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms