RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 CALHM1Q8IU99 346 aa20.82■□□□□ 0.92
PVT1-219ENST00000523427 NDNFQ8TB73 568 aa20.82■□□□□ 0.92
PVT1-219ENST00000523427 SLC22A13Q9Y226 551 aa20.82■□□□□ 0.92
PVT1-219ENST00000523427 POLDIP2Q9Y2S7 368 aa20.82■□□□□ 0.92
PVT1-219ENST00000523427 INMTO95050 263 aa20.81■□□□□ 0.92
PVT1-219ENST00000523427 ATP6V1B1P15313 513 aa20.81■□□□□ 0.92
PVT1-219ENST00000523427 CBX1P83916 185 aa20.81■□□□□ 0.92
PVT1-219ENST00000523427 KCTD18Q6PI47 426 aaPredicted RBP20.81■□□□□ 0.92
PVT1-219ENST00000523427 CD300LDQ6UXZ3 194 aa20.81■□□□□ 0.92
PVT1-219ENST00000523427 KRT74Q7RTS7 529 aa20.81■□□□□ 0.92
PVT1-219ENST00000523427 ANGPTL5Q86XS5 388 aa20.81■□□□□ 0.92
PVT1-219ENST00000523427 NRIP2Q9BQI9 281 aa20.81■□□□□ 0.92
PVT1-219ENST00000523427 OCSTAMPQ9BR26 566 aa20.81■□□□□ 0.92
PVT1-219ENST00000523427 MROQ9BYG7 248 aa20.81■□□□□ 0.92
PVT1-219ENST00000523427 MAGIXQ9H6Y5 334 aa20.81■□□□□ 0.92
PVT1-219ENST00000523427 COL7A1Q02388 2944 aa20.81■□□□□ 0.92
PVT1-219ENST00000523427 K7N7A8 449 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 PRODHO43272 600 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 IGHV1-8P0DP01 117 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 KRTAP10-11P60412 298 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 ACTA2P62736 377 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 ACTG2P63267 376 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 ACTC1P68032 377 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 ACTA1P68133 377 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 APOFQ13790 326 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 FAM98BQ52LJ0 330 aaKnown RBP20.8■□□□□ 0.92
PVT1-219ENST00000523427 KHDC1LQ5JSQ8 128 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 GDPD3Q7L5L3 318 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 OR11H6Q8NGC7 330 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 IKZF2Q9UKS7 526 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 TENM3Q9P273 2699 aa20.8■□□□□ 0.92
PVT1-219ENST00000523427 ACOD1A6NK06 481 aa20.79■□□□□ 0.92
PVT1-219ENST00000523427 PRR32B1ATL7 298 aa20.79■□□□□ 0.92
PVT1-219ENST00000523427 NOS1APO75052 506 aaPredicted RBP20.79■□□□□ 0.92
PVT1-219ENST00000523427 HOXD3P31249 432 aaPredicted RBP20.79■□□□□ 0.92
PVT1-219ENST00000523427 SLC35A2P78381 396 aa20.79■□□□□ 0.92
PVT1-219ENST00000523427 MFGE8Q08431 387 aaPredicted RBP20.79■□□□□ 0.92
PVT1-219ENST00000523427 EDDM3AQ14507 147 aa20.79■□□□□ 0.92
PVT1-219ENST00000523427 TCTEX1D4Q5JR98 221 aa20.79■□□□□ 0.92
PVT1-219ENST00000523427 CLVS2Q5SYC1 327 aa20.79■□□□□ 0.92
PVT1-219ENST00000523427 DHFR2Q86XF0 187 aa20.79■□□□□ 0.92
PVT1-219ENST00000523427 SNX3O60493 162 aa20.78■□□□□ 0.92
PVT1-219ENST00000523427 DHRS3O75911 302 aa20.78■□□□□ 0.92
PVT1-219ENST00000523427 HMGN1P05114 100 aa20.78■□□□□ 0.92
PVT1-219ENST00000523427 CD24P25063 80 aa20.78■□□□□ 0.92
PVT1-219ENST00000523427 SPATS1Q496A3 300 aa20.78■□□□□ 0.92
PVT1-219ENST00000523427 SLC35D3Q5M8T2 416 aa20.78■□□□□ 0.92
PVT1-219ENST00000523427 TMEM236Q5W0B7 351 aa20.78■□□□□ 0.92
PVT1-219ENST00000523427 TRMT10AQ8TBZ6 339 aaKnown RBP20.78■□□□□ 0.92
PVT1-219ENST00000523427 ZNF714Q96N38 554 aa20.78■□□□□ 0.92
PVT1-219ENST00000523427 YIPF3Q9GZM5 350 aa20.78■□□□□ 0.92
PVT1-219ENST00000523427 NDE1Q9NXR1 346 aa20.78■□□□□ 0.92
PVT1-219ENST00000523427 PQLC2LA1A4F0 135 aa20.77■□□□□ 0.92
PVT1-219ENST00000523427 RIDAP52758 137 aaKnown RBP20.77■□□□□ 0.92
PVT1-219ENST00000523427 CD69Q07108 199 aa20.77■□□□□ 0.92
PVT1-219ENST00000523427 ZNF829Q3KNS6 432 aaPredicted RBP20.77■□□□□ 0.92
PVT1-219ENST00000523427 ZNF676Q8N7Q3 588 aa20.77■□□□□ 0.92
PVT1-219ENST00000523427 TPRX1Q8N7U7 411 aa20.77■□□□□ 0.92
PVT1-219ENST00000523427 MYDGFQ969H8 173 aa20.77■□□□□ 0.92
PVT1-219ENST00000523427 HES4Q9HCC6 221 aa20.77■□□□□ 0.92
PVT1-219ENST00000523427 RYR3Q15413 4870 aa20.77■□□□□ 0.92
PVT1-219ENST00000523427 FAM230AA0A1W2PPH8 454 aa20.76■□□□□ 0.91
PVT1-219ENST00000523427 H3BUI4 141 aa20.76■□□□□ 0.91
PVT1-219ENST00000523427 CST1P01037 141 aa20.76■□□□□ 0.91
PVT1-219ENST00000523427 IGLV3-1P01715 115 aa20.76■□□□□ 0.91
PVT1-219ENST00000523427 TTRP02766 147 aa20.76■□□□□ 0.91
PVT1-219ENST00000523427 SLC2A5P22732 501 aa20.76■□□□□ 0.91
PVT1-219ENST00000523427 DYNLT3P51808 116 aa20.76■□□□□ 0.91
PVT1-219ENST00000523427 DEGS2Q6QHC5 323 aa20.76■□□□□ 0.91
PVT1-219ENST00000523427 TMEM179BQ7Z7N9 219 aa20.76■□□□□ 0.91
PVT1-219ENST00000523427 CAPSLQ8WWF8 208 aa20.76■□□□□ 0.91
PVT1-219ENST00000523427 NUFIP1Q9UHK0 495 aaKnown RBP20.76■□□□□ 0.91
PVT1-219ENST00000523427 COPS3Q9UNS2 423 aa20.76■□□□□ 0.91
PVT1-219ENST00000523427 TSSC4Q9Y5U2 329 aaPredicted RBP20.76■□□□□ 0.91
PVT1-219ENST00000523427 SH2D7A6NKC9 451 aaPredicted RBP20.75■□□□□ 0.91
PVT1-219ENST00000523427 F8VVB4 439 aa20.75■□□□□ 0.91
PVT1-219ENST00000523427 F8VWA3 439 aa20.75■□□□□ 0.91
PVT1-219ENST00000523427 H3BSH0 61 aa20.75■□□□□ 0.91
PVT1-219ENST00000523427 MAGEB4O15481 346 aaPredicted RBP20.75■□□□□ 0.91
PVT1-219ENST00000523427 LPLP06858 475 aa20.75■□□□□ 0.91
PVT1-219ENST00000523427 CHRM2P08172 466 aa20.75■□□□□ 0.91
PVT1-219ENST00000523427 C10orf99Q6UWK7 81 aa20.75■□□□□ 0.91
PVT1-219ENST00000523427 PLEKHG7Q6ZR37 379 aa20.75■□□□□ 0.91
PVT1-219ENST00000523427 ZNF679Q8IYX0 411 aa20.75■□□□□ 0.91
PVT1-219ENST00000523427 RCC1LQ96I51 464 aaKnown RBP20.75■□□□□ 0.91
PVT1-219ENST00000523427 INPP5EQ9NRR6 644 aa20.75■□□□□ 0.91
PVT1-219ENST00000523427 LOC110117498-PIK3R3F6TDL0 507 aa20.74■□□□□ 0.91
PVT1-219ENST00000523427 GNGT2O14610 69 aa20.74■□□□□ 0.91
PVT1-219ENST00000523427 ZNF737O75373 536 aa20.74■□□□□ 0.91
PVT1-219ENST00000523427 RBP4P02753 201 aa20.74■□□□□ 0.91
PVT1-219ENST00000523427 MS4A2Q01362 244 aa20.74■□□□□ 0.91
PVT1-219ENST00000523427 ABCA11PQ4W5N1 156 aa20.74■□□□□ 0.91
PVT1-219ENST00000523427 MINOS1Q5TGZ0 78 aa20.74■□□□□ 0.91
PVT1-219ENST00000523427 TCF23Q7RTU1 214 aa20.74■□□□□ 0.91
PVT1-219ENST00000523427 BCAS4Q8TDM0 211 aa20.74■□□□□ 0.91
PVT1-219ENST00000523427 STMN2Q93045 179 aa20.74■□□□□ 0.91
PVT1-219ENST00000523427 ITFG2Q969R8 447 aa20.74■□□□□ 0.91
PVT1-219ENST00000523427 APOL4Q9BPW4 351 aa20.74■□□□□ 0.91
PVT1-219ENST00000523427 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.74■□□□□ 0.91
PVT1-219ENST00000523427 MINOS1-NBL1R4GNA1 71 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms