RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 A0A087WUJ7 227 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TRAV8-6A0A0B4J262 113 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 A0A1B0GXF2 115 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 BTNL10A8MVZ5 291 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 CHP2O43745 196 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 ZNF780AO75290 641 aaPredicted RBP3.08□□□□□ -1.92
SKP1-209ENST00000522552 OR2B3O76000 313 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 ICAM2P13598 275 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 ATF1P18846 271 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 MYL12AP19105 171 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 RAB3BP20337 219 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TAC1P20366 129 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 CXCR1P25024 350 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 DRD3P35462 400 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 RPL5P46777 297 aaKnown RBP3.08□□□□□ -1.92
SKP1-209ENST00000522552 LGALS7P47929 136 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 REG1BP48304 166 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 NCBP2P52298 156 aaKnown RBP eCLIP3.08□□□□□ -1.92
SKP1-209ENST00000522552 VSX2P58304 361 aaPredicted RBP3.08□□□□□ -1.92
SKP1-209ENST00000522552 DYNLL1P63167 89 aaKnown RBP3.08□□□□□ -1.92
SKP1-209ENST00000522552 HBG1P69891 147 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 HBG2P69892 147 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TFAMQ00059 246 aaKnown RBP3.08□□□□□ -1.92
SKP1-209ENST00000522552 INCA1Q0VD86 236 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 EDDM3AQ14507 147 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 GINS1Q14691 196 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TMEM97Q5BJF2 176 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 AVPI1Q5T686 147 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 KDM4DQ6B0I6 523 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 OR10K2Q6IF99 312 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 UGT2A3Q6UWM9 527 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 RFLNAQ6ZTI6 216 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 NOTCH2NLQ7Z3S9 236 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 UBALD2Q8IYN6 164 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 C12orf29Q8N999 325 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 ZNF485Q8NCK3 441 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TMEM161BQ8NDZ6 487 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 OR2Z1Q8NG97 314 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 OR11H7Q8NGC8 314 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 OR4P4Q8NGL7 312 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 OR1N2Q8NGR9 330 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 RDH5Q92781 318 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 YIPF5Q969M3 257 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 MARC2Q969Z3 335 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 CEP170P1Q96L14 293 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 SYT15Q9BQS2 421 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 MED18Q9BUE0 208 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 EMC6Q9BV81 110 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TRIM15Q9C019 465 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 PANK3Q9H999 370 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 EDA2RQ9HAV5 297 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 AIG1Q9NVV5 245 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 RBFOX1Q9NWB1 397 aaKnown RBP3.08□□□□□ -1.92
SKP1-209ENST00000522552 ZNF226Q9NYT6 803 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 NYAP2Q9P242 653 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 ERGIC3Q9Y282 383 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 ZNF608Q9ULD9 1512 aaPredicted RBP3.08□□□□□ -1.92
SKP1-209ENST00000522552 A0A0J9YXV3 536 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 C15orf65H3BRN8 121 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 PLIN3O60664 434 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TBL1XO60907 577 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 SPAG7O75391 227 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 IGHV3-48P01763 117 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 PATE4P0C8F1 98 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 GABRA1P14867 456 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 CD1EP15812 388 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 MPIP34949 423 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 CDK9P50750 372 aaKnown RBP3.08□□□□□ -1.92
SKP1-209ENST00000522552 ZNF138P52744 262 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 RAB25P57735 213 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TAS2R46P59540 309 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 NAA20P61599 178 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 RGNQ15493 299 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TMEM255AQ5JRV8 349 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 LEMD1Q68G75 181 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 GLT6D1Q7Z4J2 308 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TMEM61Q8N0U2 210 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 ZCCHC24Q8N2G6 241 aaKnown RBP3.08□□□□□ -1.92
SKP1-209ENST00000522552 TMEM86BQ8N661 226 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TMEM252Q8N6L7 170 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 ZNF676Q8N7Q3 588 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 COX18Q8N8Q8 333 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 SPPL2BQ8TCT7 592 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 CYGBQ8WWM9 190 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TMEM190Q8WZ59 177 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 SIGLEC12Q96PQ1 595 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 OR2M4Q96R27 311 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TIPINQ9BVW5 301 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 MROQ9BYG7 248 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 BOLA2Q9H3K6 86 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TXNIPQ9H3M7 391 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 C6orf106Q9H6K1 298 aaPredicted RBP3.08□□□□□ -1.92
SKP1-209ENST00000522552 JPT2Q9H910 190 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 GNB4Q9HAV0 340 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 TAS2R5Q9NYW4 299 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 DHRS4-AS1Q9P1J3 65 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 DKKL1Q9UK85 242 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 SIGLEC7Q9Y286 467 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 POLR1DQ9Y2S0 133 aa3.08□□□□□ -1.92
SKP1-209ENST00000522552 PRELID3BQ9Y3B1 194 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms