RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ZDBF2Q9HCK1 2354 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 CTDSPLO15194 276 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 PEBP1P30086 187 aaKnown RBP14.4□□□□□ -0.1
USP42-207ENST00000521713 FXNQ16595 210 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 GGNBP1Q5YKI7 109 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 SLC36A1Q7Z2H8 476 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 C9orf62Q8N4C0 152 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 SOX7Q9BT81 388 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 PARD6AQ9NPB6 346 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 KIAA1456Q9P272 454 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 SMUG1Q53HV7 270 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 OR13C5Q8NGS8 318 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 SAP25Q8TEE9 199 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 RPUSD4Q96CM3 377 aaKnown RBP14.4□□□□□ -0.1
USP42-207ENST00000521713 DDA1Q9BW61 102 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 NXF2Q9GZY0 626 aaKnown RBP14.4□□□□□ -0.1
USP42-207ENST00000521713 ISG20L2Q9H9L3 353 aaKnown RBP14.4□□□□□ -0.1
USP42-207ENST00000521713 SERPINE3A8MV23 424 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 M0R143 59 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 G0S2P27469 103 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 C9orf152Q5JTZ5 239 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 SPATA46Q5T0L3 261 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 PRAMEF5Q5TYX0 476 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 PRAMEF6Q5VXH4 476 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 ZNF574Q6ZN55 896 aaPredicted RBP14.4□□□□□ -0.1
USP42-207ENST00000521713 OR51H1Q8NH63 302 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 CMTM2Q8TAZ6 248 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 RND1Q92730 232 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 AHCTF1Q8WYP5 2266 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 ZNF32P17041 273 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 FPR2P25090 351 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 UBE2G2P60604 165 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 FAM209AQ5JX71 171 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 OR10P1Q8NGE3 313 aa14.4□□□□□ -0.1
USP42-207ENST00000521713 PPP1CBP62140 327 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 GNB2P62879 340 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 FMODQ06828 376 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 CD300CQ08708 224 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 OTPQ5XKR4 325 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 ZNF638Q14966 1978 aaKnown RBP14.39□□□□□ -0.11
USP42-207ENST00000521713 A0A0B4J203 849 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 ZNF320A2RRD8 509 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 SPRY3O43610 288 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 GSTZ1O43708 216 aaPredicted RBP14.39□□□□□ -0.11
USP42-207ENST00000521713 OPRM1P35372 400 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 UBE2G1P62253 170 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 RTL8BQ17RB0 113 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 TMEM268Q5VZI3 342 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 OR5B3Q8NH48 314 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 NUDCD2Q8WVJ2 157 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 DERL3Q96Q80 235 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 SARGQ9BW04 601 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 SEC11CQ9BY50 192 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 CCL27Q9Y4X3 112 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 FOCADQ5VW36 1801 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 TMEM218A2RU14 115 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 WNT1P04628 370 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 NTF3P20783 257 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 MIDNQ504T8 468 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 PABPC1L2AQ5JQF8 200 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 LRRTM1Q86UE6 522 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 SLC25A45Q8N413 288 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 C17orf47Q8NEP4 570 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 LINC00052Q96N35 136 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 PRDM6Q9NQX0 595 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 ZNFX1Q9P2E3 1918 aaKnown RBP14.39□□□□□ -0.11
USP42-207ENST00000521713 ZNF98A6NK75 572 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 DNPH1O43598 174 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 EPPINO95925 133 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 TCTEX1D1Q8N7M0 179 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 NECAP1Q8NC96 275 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 TSPAN32Q96QS1 320 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 ADAT1Q9BUB4 502 aaKnown RBP14.39□□□□□ -0.11
USP42-207ENST00000521713 CTDSP1Q9GZU7 261 aa14.39□□□□□ -0.11
USP42-207ENST00000521713 LIN7CQ9NUP9 197 aaKnown RBP14.39□□□□□ -0.11
USP42-207ENST00000521713 NDUFB3O43676 98 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 SSSCA1O60232 199 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 WDR1O75083 606 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 OR5H8P0DN80 308 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 LRRC10Q5BKY1 277 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 EXOGQ9Y2C4 368 aaKnown RBP14.38□□□□□ -0.11
USP42-207ENST00000521713 ANKRD34CP0C6C1 535 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 ZNF528Q3MIS6 628 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 FAM219BQ5XKK7 198 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 SLC23A3Q6PIS1 610 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 THNSL2Q86YJ6 484 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 NPEPL1Q8NDH3 523 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 FGF5P12034 268 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 CCKARP32238 428 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 CD226Q15762 336 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 FAHD2BQ6P2I3 314 aaPredicted RBP14.38□□□□□ -0.11
USP42-207ENST00000521713 FAHD2AQ96GK7 314 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 AQP7P3A6NL99 342 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 CST2P09228 141 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 MLF1P58340 268 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 PNRC1Q12796 327 aaPredicted RBP14.38□□□□□ -0.11
USP42-207ENST00000521713 OR2Z1Q8NG97 314 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 RTN4IP1Q8WWV3 396 aaPredicted RBP14.38□□□□□ -0.11
USP42-207ENST00000521713 AMDHD2Q9Y303 409 aa14.38□□□□□ -0.11
USP42-207ENST00000521713 WSB1Q9Y6I7 421 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms