RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ZNF321PQ8N8H1 164 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 CIDECQ96AQ7 238 aaPredicted RBP2.16□□□□□ -2.06
SQLE-202ENST00000518604 RILPQ96NA2 401 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 SPACA5Q96QH8 159 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 OR2M4Q96R27 311 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 SND1-IT1Q9HBX3 110 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 FAM60AQ9NP50 221 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 ZNF391Q9UJN7 358 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 AP3M1Q9Y2T2 418 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 CHTOPQ9Y3Y2 248 aaKnown RBP2.16□□□□□ -2.06
SQLE-202ENST00000518604 KIAA1671Q9BY89 1806 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 TRIP11Q15643 1979 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 GSTTP1A0A1W2PQM5 241 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 KDELR3O43731 214 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 CBR3O75828 277 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 STAG3L2P0CL84 134 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 CPN2P22792 545 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 TEAD1P28347 426 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 RPL10AP62906 217 aaKnown RBP2.15□□□□□ -2.07
SQLE-202ENST00000518604 IDNKQ5T6J7 187 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 FA2HQ7L5A8 372 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 ADM2Q7Z4H4 148 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 SETD3Q86TU7 594 aaPredicted RBP2.15□□□□□ -2.07
SQLE-202ENST00000518604 ITPRIPQ8IWB1 547 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 ZDHHC22Q8N966 263 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 OR4K2Q8NGD2 314 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 OR5H2Q8NGV7 314 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 MITD1Q8WV92 249 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 SMIM8Q96KF7 97 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 C20orf144Q9BQM9 153 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 OR2S2Q9NQN1 319 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 PARP11Q9NR21 331 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 RBM22Q9NW64 420 aaKnown RBP eCLIP2.15□□□□□ -2.07
SQLE-202ENST00000518604 RAB23Q9ULC3 237 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 ACOT9Q9Y305 439 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 ZBED9Q6R2W3 1325 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 HIVEP2P31629 2446 aa2.15□□□□□ -2.07
SQLE-202ENST00000518604 A0A1W2PNN7 141 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 M0R1B8 84 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 ZNF593O00488 134 aaPredicted RBP2.14□□□□□ -2.07
SQLE-202ENST00000518604 GMDSO60547 372 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 IGHG2P01859 326 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 SEC11BP0C7V7 166 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 P2RY2P41231 377 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 TUFMP49411 452 aaKnown RBP2.14□□□□□ -2.07
SQLE-202ENST00000518604 SLC18A1P54219 525 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 MEF2BQ02080 365 aaPredicted RBP2.14□□□□□ -2.07
SQLE-202ENST00000518604 IFFO1Q0D2I5 559 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 PMVKQ15126 192 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 ATP6AP1LQ52LC2 224 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 CLEC19AQ6UXS0 136 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 CYP4Z2PQ8N1L4 340 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 OR4D6Q8NGJ1 314 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 OR13C9Q8NGT0 318 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 NDNFQ8TB73 568 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 ITLN2Q8WWU7 325 aaPredicted RBP2.14□□□□□ -2.07
SQLE-202ENST00000518604 METTL26Q96S19 204 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 THTPAQ9BU02 230 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 ZNF492Q9P255 531 aa2.14□□□□□ -2.07
SQLE-202ENST00000518604 SEC16AO15027 2179 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 SHROOM3Q8TF72 1996 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 KIR2DS1A0A191URI9 304 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 E7EWF7 191 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 KLHL2O95198 593 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 GZMAP12544 262 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 ZNF35P13682 527 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 IHHQ14623 411 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 ELOCQ15369 112 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 CLLU1OSQ5K130 101 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 CLEC12AQ5QGZ9 265 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 NELFCDQ8IXH7 590 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 ZNF555Q8NEP9 628 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 OR6N2Q8NGY6 317 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 OR8K3Q8NH51 312 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 CHID1Q9BWS9 393 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 TM6SF2Q9BZW4 377 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 PRORYQ9H606 182 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 VSIRQ9H7M9 311 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 VAPAQ9P0L0 249 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 TAC3Q9UHF0 121 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 ZNF229Q9UJW7 825 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 KLF13Q9Y2Y9 288 aaPredicted RBP2.13□□□□□ -2.07
SQLE-202ENST00000518604 V9GYY9 64 aa2.13□□□□□ -2.07
SQLE-202ENST00000518604 BAZ2AQ9UIF9 1905 aaKnown RBP2.13□□□□□ -2.07
SQLE-202ENST00000518604 IGLL5B9A064 214 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 PRMT5O14744 637 aaPredicted RBP2.12□□□□□ -2.07
SQLE-202ENST00000518604 RNF113AO15541 343 aaKnown RBP2.12□□□□□ -2.07
SQLE-202ENST00000518604 SLC37A4O43826 429 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 OR2A4O95047 310 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 CXorf1O96002 111 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 HRES1P13985 223 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 HTR2CP28335 458 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 SLC6A1P30531 599 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 GPR4P46093 362 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 ACOT2P49753 483 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 IL5RAQ01344 420 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 TAL2Q16559 108 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 HNRNPA1L2Q32P51 320 aaKnown RBP2.12□□□□□ -2.07
SQLE-202ENST00000518604 DEFB134Q4QY38 66 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 UGT2A3Q6UWM9 527 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms