RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 C17orf98A8MV24 154 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 PRODHO43272 600 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ATP6V1B1P15313 513 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ALOX5APP20292 161 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 DLX6P56179 175 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 COL10A1Q03692 680 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 EDDM3AQ14507 147 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ZNF829Q3KNS6 432 aaPredicted RBP12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 FAM98BQ52LJ0 330 aaKnown RBP12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ZNF626Q68DY1 528 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 LCN8Q6JVE9 175 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 KCTD18Q6PI47 426 aaPredicted RBP12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 GDPD3Q7L5L3 318 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 CENPVQ7Z7K6 275 aaPredicted RBP12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 CALHM1Q8IU99 346 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 NRIP2Q9BQI9 281 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 IKZF2Q9UKS7 526 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 SLC22A13Q9Y226 551 aa12.24□□□□□ -0.45
CSGALNACT1-204ENST00000517494 INMTO95050 263 aa12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 IGHV1-8P0DP01 117 aa12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ACTA2P62736 377 aa12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ACTG2P63267 376 aa12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ACTC1P68032 377 aa12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ACTA1P68133 377 aa12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 MFGE8Q08431 387 aaPredicted RBP12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 APOFQ13790 326 aa12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 CD300LDQ6UXZ3 194 aa12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 DHFR2Q86XF0 187 aa12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 WFDC9Q8NEX5 89 aa12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 TRMT10AQ8TBZ6 339 aaKnown RBP12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 CAPSLQ8WWF8 208 aa12.23□□□□□ -0.45
CSGALNACT1-204ENST00000517494 WI2-2373I1.2A0A1W2PRP0 233 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ACOD1A6NK06 481 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 H3BUI4 141 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 K7N7A8 449 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 DHRS3O75911 302 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 HMGN1P05114 100 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 HOXD3P31249 432 aaPredicted RBP12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 RIDAP52758 137 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 CD83Q01151 205 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 CD69Q07108 199 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 SPATS1Q496A3 300 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 SLC35D3Q5M8T2 416 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 CLVS2Q5SYC1 327 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 KRT74Q7RTS7 529 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ANGPTL5Q86XS5 388 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ZNF676Q8N7Q3 588 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 OR11H6Q8NGC7 330 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ZNF714Q96N38 554 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 YIPF3Q9GZM5 350 aa12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSGALNACT1-204ENST00000517494 FAM230AA0A1W2PPH8 454 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 PQLC2LA1A4F0 135 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 PRR32B1ATL7 298 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 LOC110117498-PIK3R3F6TDL0 507 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 GNGT2O14610 69 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 SNX3O60493 162 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 NOS1APO75052 506 aaPredicted RBP12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 DNAJC8O75937 253 aaPredicted RBP12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 CLIC3O95833 236 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 CST1P01037 141 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 CD24P25063 80 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 AZGP1P25311 298 aaKnown RBP12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 KRTAP10-11P60412 298 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 BCL2L15Q5TBC7 163 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 TPRX1Q8N7U7 411 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 OR4X2Q8NGF9 303 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 MYDGFQ969H8 173 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 RCC1LQ96I51 464 aaKnown RBP12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 OCSTAMPQ9BR26 566 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 TEX12Q9BXU0 123 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 ZNF556Q9HAH1 456 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 HES4Q9HCC6 221 aa12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 NUFIP1Q9UHK0 495 aaKnown RBP12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 TSSC4Q9Y5U2 329 aaPredicted RBP12.21□□□□□ -0.45
CSGALNACT1-204ENST00000517494 IGHV2-26A0A0B4J1V2 119 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 H3BSH0 61 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 RBP4P02753 201 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 TTRP02766 147 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 LPLP06858 475 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 CHRM2P08172 466 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 SLC2A5P22732 501 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 DYNLT3P51808 116 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 TCTEX1D4Q5JR98 221 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 MINOS1Q5TGZ0 78 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 LCN1P1Q5VSP4 162 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 TMEM236Q5W0B7 351 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 DEGS2Q6QHC5 323 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 PLEKHG7Q6ZR37 379 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 ZNF679Q8IYX0 411 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 BCAS4Q8TDM0 211 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 LRGUKQ96M69 825 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 MED4Q9NPJ6 270 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 COPS3Q9UNS2 423 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 SESN1Q9Y6P5 492 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 MINOS1-NBL1R4GNA1 71 aa12.2□□□□□ -0.46
CSGALNACT1-204ENST00000517494 hADV38S2A0JD32 116 aa12.19□□□□□ -0.46
CSGALNACT1-204ENST00000517494 SH2D7A6NKC9 451 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT1-204ENST00000517494 E9PQ18 207 aa12.19□□□□□ -0.46
CSGALNACT1-204ENST00000517494 DLGAP1O14490 977 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms