RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ARSBP15848 533 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 ALOX5APP20292 161 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 RPA3P35244 121 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 KIR2DL3P43628 341 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 PRR5P85299 388 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 CAV1Q03135 178 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 EMX2Q04743 252 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 PIGFQ07326 219 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 DPTQ07507 201 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 KIAA0141Q14154 515 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 NRF1Q16656 503 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 TMEM128Q5BJH2 165 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 UNQ9370/PRO34162Q6UXP9 181 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 LANCL3Q6ZV70 420 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 RDH10Q8IZV5 341 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 BPIFB6Q8NFQ5 453 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR7A2PQ8NGA2 310 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR4P4Q8NGL7 312 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR6T1Q8NGN1 323 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR10G9Q8NGN4 311 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR10A6Q8NH74 314 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 RNF138Q8WVD3 245 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 UCN3Q969E3 161 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 RAB11FIP5Q9BXF6 653 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 TEX101Q9BY14 249 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 ABCG5Q9H222 651 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 PPDPFQ9H3Y8 114 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 MED9Q9NWA0 146 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 TESQ9UGI8 421 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 PACSIN3Q9UKS6 424 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 TNRC6BQ9UPQ9 1833 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 MYLKQ15746 1914 aa4.35□□□□□ -1.71
TRAPPC11-208ENST00000511955 DSPP15924 2871 aaKnown RBP4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 A0A1B0GW55 424 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 C10orf142B7Z368 130 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 TRIM49D1C9J1S8 452 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 E7ENX8 843 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 TRAPPC2LH3BP13 241 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 MANBAO00462 879 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 EIF4E2O60573 245 aaKnown RBP4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 GABARAPO95166 117 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 TNFP01375 233 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 MBPP02686 304 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR8U8P0C7N1 319 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR56A5P0C7T3 313 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 DUX4L2P0CJ85 424 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 DUX4L3P0CJ86 424 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 DUX4L5P0CJ88 424 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 DUX4L6P0CJ89 424 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 DUX4L7P0CJ90 424 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 CT45A8P0DMV1 189 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 CT45A9P0DMV2 189 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 CD59P13987 128 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 ABOP16442 354 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 FASP25445 335 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 PPIFP30405 207 aaKnown RBP4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 RFC3P40938 356 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 ELK3P41970 407 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR3A2P47893 321 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 MEOX1P50221 254 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 RAB25P57735 213 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF121P58317 390 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 TAS2R31P59538 309 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 SNRPD2P62316 118 aaKnown RBP4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 MFGE8Q08431 387 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZIC1Q15915 447 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 C3AR1Q16581 482 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 CT45A2Q5DJT8 189 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 NXNL2Q5VZ03 156 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 LAMTOR1Q6IAA8 161 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 DUX4L9Q6RFH8 374 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 TMPPEQ6ZT21 453 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 DEFB107AQ8IZN7 70 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 D2HGDHQ8N465 521 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 C12orf45Q8N5I9 185 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR52N4Q8NGI2 321 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR8U1Q8NH10 309 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR4C6Q8NH72 309 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR4S2Q8NH73 311 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 ACOT12Q8WYK0 555 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR11A1Q9GZK7 315 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 C5orf66Q9H5L9 145 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 SIGLEC8Q9NYZ4 499 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 TECRQ9NZ01 308 aaKnown RBP4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 DUX4Q9UBX2 424 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC23A2Q9UGH3 650 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF230Q9UIE0 474 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 DUSP13Q9UII6 198 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 FZR1Q9UM11 496 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 PSG8Q9UQ74 426 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 IGF2RP11717 2491 aa4.34□□□□□ -1.71
TRAPPC11-208ENST00000511955 A0A0B4J2E0 115 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 PRAMEF33A0A0G2JMD5 474 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 A0A1B0GX12 115 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR5H14A6NHG9 310 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 CDC14BO60729 498 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 CA11O75493 328 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 ESR1P03372 595 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 SLC35G4P0C7Q5 338 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 MAKP20794 623 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 392.2 ms