RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 KRT14P02533 472 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 HSPB1P04792 205 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 SERPIND1P05546 499 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 HSMCR30P0CW71 290 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF19P17023 458 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 CNTFRP26992 372 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 HSD17B2P37059 387 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 COILP38432 576 aaPredicted RBP2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 SYKP43405 635 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 RPL29P47914 159 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 RAB38P57729 211 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 RAB10P61026 200 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 GNB2P62879 340 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 XIAPP98170 497 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 ITIH4Q14624 930 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 TAF1AQ15573 450 aaPredicted RBP2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF79Q15937 498 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 CCSMST1Q4G0I0 132 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 ANKRD22Q5VYY1 191 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 PYHIN1Q6K0P9 492 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 BZW1Q7L1Q6 419 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 MOB3BQ86TA1 216 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 TGIF2LXQ8IUE1 241 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 CCDC50Q8IVM0 306 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 CEND1Q8N111 149 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 LINC01561Q8N1V8 128 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 C17orf78Q8N4C9 275 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 RNF10Q8N5U6 811 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 SPATA4Q8NEY3 305 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 OR4K17Q8NGC6 315 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 OR4K2Q8NGD2 314 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 ABHD3Q8WU67 409 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 PIGCQ92535 297 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 PEX13Q92968 403 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 HAVCR1Q96D42 359 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 ARL5BQ96KC2 179 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 MCEEQ96PE7 176 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 TSG101Q99816 390 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 MAPKAP1Q9BPZ7 522 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 IQCGQ9H095 443 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 MAGT1Q9H0U3 335 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 Q9H3A6 140 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF385DQ9H6B1 395 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 ELOVL3Q9HB03 270 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 GNG12Q9UBI6 72 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 RIMS3Q9UJD0 308 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 RASD1Q9Y272 281 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 PIGLQ9Y2B2 252 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 FSIP2Q5CZC0 6907 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 DNAH2Q9P225 4427 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 METTL21EPA6NDL7 271 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 M0QX08 132 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 KCNK1O00180 336 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 HDAC3O15379 428 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 S100A9P06702 114 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 TPM1P09493 284 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 STAG3L3P0CL85 134 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 TCN1P20061 433 aaPredicted RBP2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 UQCRC2P22695 453 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 CCR7P32248 378 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 CD80P33681 288 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 PTGDSP41222 190 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 EVX1P49640 407 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 ETV1P50549 477 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 HNRNPA3P51991 378 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 FOXA1P55317 472 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 RAB8AP61006 207 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 RAB40BQ12829 278 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 LAGE3Q14657 143 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 TIGITQ495A1 244 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 CTSL3PQ5NE16 218 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 CCDC122Q5T0U0 273 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 DNAJC24Q6P3W2 148 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 MOB1BQ7L9L4 216 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 PRR22Q8IZ63 422 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 TBC1D19Q8N5T2 526 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 MFSD9Q8NBP5 474 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 STXBP6Q8NFX7 210 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 OR4C5Q8NGB2 326 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 OR51D1Q8NGF3 324 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 OR9A1PQ8NGU1 263 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 OR2V1Q8NHB1 315 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 NT5CQ8TCD5 201 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 DNAJA4Q8WW22 397 aaPredicted RBP2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 PHYHIPLQ96FC7 376 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 NOL4LQ96MY1 436 aaPredicted RBP2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 SLC38A2Q96QD8 506 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 PEBP4Q96S96 227 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 PITX2Q99697 317 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 NEK6Q9HC98 313 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 UFSP2Q9NUQ7 469 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 PAK1IP1Q9NWT1 392 aaPredicted RBP2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 OR1A1Q9P1Q5 309 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 LCMT1Q9UIC8 334 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 CELA1Q9UNI1 258 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 KLK5Q9Y337 293 aaPredicted RBP2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 OARD1Q9Y530 152 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 NPTNQ9Y639 398 aa2.44□□□□□ -2.02
TOPBP1-208ENST00000511439 DNAH6Q9C0G6 4158 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms