RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 CISD2Q8N5K1 135 aaKnown RBP8.81□□□□□ -1
PDGFRA-207ENST00000509092 ZNF738Q8NE65 137 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 OR4C5Q8NGB2 326 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 OR51G1Q8NGK1 321 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 OR5B12Q96R08 314 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 MAGT1Q9H0U3 335 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 PLK3Q9H4B4 646 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 KIR3DX1Q9H7L2 352 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 CALHM2Q9HA72 323 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 ZNF581Q9P0T4 197 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 ZNF319Q9P2F9 582 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 FBLN5Q9UBX5 448 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 HSPB7Q9UBY9 170 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 RNF115Q9Y4L5 304 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 RFNGQ9Y644 331 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 COX11Q9Y6N1 276 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 IGHV2-70DA0A0C4DH43 119 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 MAP1LC3B2A6NCE7 125 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 S100A7P31151 101 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 GALR1P47211 349 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 SMAD3P84022 425 aaKnown RBP8.81□□□□□ -1
PDGFRA-207ENST00000509092 ZNF92Q03936 586 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 TRMT12Q53H54 448 aaKnown RBP8.81□□□□□ -1
PDGFRA-207ENST00000509092 RSPO2Q6UXX9 243 aaPredicted RBP8.81□□□□□ -1
PDGFRA-207ENST00000509092 DPPA3Q6W0C5 159 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 IL22RA1Q8N6P7 574 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 C12orf76Q8N812 135 aaPredicted RBP8.81□□□□□ -1
PDGFRA-207ENST00000509092 TNFRSF14Q92956 283 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 SCARF2Q96GP6 870 aaPredicted RBP8.81□□□□□ -1
PDGFRA-207ENST00000509092 PGAM5Q96HS1 289 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 ZNF514Q96K75 400 aaPredicted RBP8.81□□□□□ -1
PDGFRA-207ENST00000509092 MAP1LC3BQ9GZQ8 125 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 LYRM2Q9NU23 88 aaPredicted RBP8.81□□□□□ -1
PDGFRA-207ENST00000509092 DNAJB12Q9NXW2 375 aaKnown RBP8.81□□□□□ -1
PDGFRA-207ENST00000509092 OR6C3Q9NZP0 311 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 SERGEFQ9UGK8 458 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 CLEC4EQ9ULY5 219 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 HHLA2Q9UM44 414 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 HS3ST2Q9Y278 367 aa8.81□□□□□ -1
PDGFRA-207ENST00000509092 ANKUB1A6NFN9 424 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 M0QZ24 198 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 PITX3O75364 302 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 TYMSP04818 313 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 CT45A8P0DMV1 189 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 CT45A9P0DMV2 189 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 EPHA8P29322 1005 aaPredicted RBP8.8□□□□□ -1
PDGFRA-207ENST00000509092 SFTPDP35247 375 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 ECI1P42126 302 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 EMDP50402 254 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 EMP2P54851 167 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 TAS2R46P59540 309 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 EWSR1Q01844 656 aaKnown RBP eCLIP8.8□□□□□ -1
PDGFRA-207ENST00000509092 MPV17LQ2QL34 196 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 FBLN7Q53RD9 439 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 CT45A2Q5DJT8 189 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 C9orf50Q5SZB4 431 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 OGFOD3Q6PK18 319 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 CENPVQ7Z7K6 275 aaPredicted RBP8.8□□□□□ -1
PDGFRA-207ENST00000509092 WDFY1Q8IWB7 410 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 LRRC75AQ8NAA5 344 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 NECAP1Q8NC96 275 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 LINC00615Q96LM1 132 aaPredicted RBP8.8□□□□□ -1
PDGFRA-207ENST00000509092 GABRG3Q99928 467 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 MACROD1Q9BQ69 325 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 EHFQ9NZC4 300 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 TRAV1-1A0A0B4J248 108 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 CXorf51AA0A1B0GTR3 108 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 CRYM-AS1A6NIL9 109 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 ZNF732B4DXR9 585 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 F6UZH7 168 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 H7C1C5 153 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 RENP00797 406 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 HRASP01112 189 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 HIST1H1DP16402 221 aaKnown RBP8.8□□□□□ -1
PDGFRA-207ENST00000509092 HSD11B1P28845 292 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 BCL6P41182 706 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 CTXN1P60606 82 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 LCN6P62502 163 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 MORN2Q502X0 79 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 NUP54Q7Z3B4 507 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 LHFPL4Q7Z7J7 247 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 TMEM123Q8N131 208 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 FBXL14Q8N1E6 418 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 IL22RA2Q969J5 263 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 TMEM9BQ9NQ34 198 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.8□□□□□ -1
PDGFRA-207ENST00000509092 MRPL22Q9NWU5 206 aaKnown RBP8.8□□□□□ -1
PDGFRA-207ENST00000509092 SLC45A2Q9UMX9 530 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 PPIAL4AQ9Y536 164 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 LRRK1Q38SD2 2015 aa8.8□□□□□ -1
PDGFRA-207ENST00000509092 TMEM14DPA8MWL7 114 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 CNOT4O95628 575 aaKnown RBP8.79□□□□□ -1
PDGFRA-207ENST00000509092 BCL2P10415 239 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 RPS20P60866 119 aaKnown RBP8.79□□□□□ -1
PDGFRA-207ENST00000509092 ROM1Q03395 351 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 TCEAL5Q5H9L2 206 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 EMC4Q5J8M3 183 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 LHX8Q68G74 356 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 SLC18B1Q6NT16 456 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 CXCL17Q6UXB2 119 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms