RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 MS4A7Q9GZW8 240 aaPredicted RBP12.45□□□□□ -0.42
TRIO-211ENST00000508343 COMMD4Q9H0A8 199 aa12.45□□□□□ -0.42
TRIO-211ENST00000508343 SLC25A10Q9UBX3 287 aaPredicted RBP12.45□□□□□ -0.42
TRIO-211ENST00000508343 ZNF222Q9UK12 451 aa12.45□□□□□ -0.42
TRIO-211ENST00000508343 DIMT1Q9UNQ2 313 aaKnown RBP12.45□□□□□ -0.42
TRIO-211ENST00000508343 CAB39Q9Y376 341 aaPredicted RBP12.45□□□□□ -0.42
TRIO-211ENST00000508343 EXOSC1Q9Y3B2 195 aaKnown RBP12.45□□□□□ -0.42
TRIO-211ENST00000508343 MAB21L2Q9Y586 359 aa12.45□□□□□ -0.42
TRIO-211ENST00000508343 IGHV3OR16-10A0A075B7F0 116 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 IGKV1-9A0A0C4DH69 117 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 TRBV2A0A0J9YWF9 115 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 RFPL4AA6NLU0 287 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 RFPL4AL1F8VTS6 287 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 PLATP00750 562 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 MMP9P14780 707 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 MYL12AP19105 171 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 PRDX2P32119 198 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 RBP2P50120 134 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 GTF2A1P52655 376 aaPredicted RBP12.44□□□□□ -0.42
TRIO-211ENST00000508343 MTCP1P56278 107 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 CAV3P56539 151 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 ERVK11-1P61568 191 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 RBMS3Q6XE24 437 aaKnown RBP12.44□□□□□ -0.42
TRIO-211ENST00000508343 ZNRF1Q8ND25 227 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 OR5AK2Q8NH90 309 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 ZFAND2BQ8WV99 257 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 TFAP2CQ92754 450 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 GGHQ92820 318 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 TBX15Q96SF7 602 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 DCTN5Q9BTE1 182 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 C19orf24Q9BVV8 132 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 HES4Q9HCC6 221 aa12.44□□□□□ -0.42
TRIO-211ENST00000508343 CHCHD3Q9NX63 227 aaKnown RBP12.44□□□□□ -0.42
TRIO-211ENST00000508343 STAB1Q9NY15 2570 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 TRAV40A0A0B4J280 105 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 EFCAB10A6NFE3 127 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 SFTPBP07988 381 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 OCM2P0CE71 109 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 OCMP0CE72 109 aaPredicted RBP12.43□□□□□ -0.42
TRIO-211ENST00000508343 NDUFB7P17568 137 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 AZGP1P25311 298 aaKnown RBP12.43□□□□□ -0.42
TRIO-211ENST00000508343 BPIFB3P59826 476 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 MED21Q13503 144 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 PDCD1Q15116 288 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 CCDC58Q4VC31 144 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 GPR157Q5UAW9 335 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 RPL22L1Q6P5R6 122 aaKnown RBP12.43□□□□□ -0.42
TRIO-211ENST00000508343 C9orf139Q6ZV77 190 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 SLC25A26Q70HW3 274 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 BATF2Q8N1L9 274 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 CD177Q8N6Q3 437 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 C8orf46Q8TAG6 207 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 FBLIM1Q8WUP2 373 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 H1FXQ92522 213 aaKnown RBP12.43□□□□□ -0.42
TRIO-211ENST00000508343 SPSB1Q96BD6 273 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 CEP19Q96LK0 163 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 PDCD1LG2Q9BQ51 273 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 SIRPDQ9H106 197 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 ZCCHC4Q9H5U6 513 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 BABAM2Q9NXR7 383 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 MTCH1Q9NZJ7 389 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 KPTNQ9Y664 436 aa12.43□□□□□ -0.42
TRIO-211ENST00000508343 H0YJX3 145 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 TRIM77I1YAP6 450 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 SLC1A7O00341 560 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 KNG1P01042 644 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 MT-ND2P03891 347 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 PIPP12273 146 aaPredicted RBP12.42□□□□□ -0.42
TRIO-211ENST00000508343 ST3GAL4Q11206 333 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 OR2G6Q5TZ20 316 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 LAIR2Q6ISS4 152 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 LHFPL2Q6ZUX7 228 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 SERPINA12Q8IW75 414 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 MKXQ8IYA7 352 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 CMTM4Q8IZR5 234 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 ZNF561Q8N587 486 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 SIGLECL1Q8N7X8 197 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 TMEM185AQ8NFB2 350 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 OR5D14Q8NGL3 314 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 NRG4Q8WWG1 115 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 SLAMF9Q96A28 289 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 OPALINQ96PE5 141 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 NEK6Q9HC98 313 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 PLCXD1Q9NUJ7 323 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 CNOT2Q9NZN8 540 aaKnown RBP12.42□□□□□ -0.42
TRIO-211ENST00000508343 ONECUT1Q9UBC0 465 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 CLEC2DQ9UHP7 191 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 DHDHQ9UQ10 334 aa12.42□□□□□ -0.42
TRIO-211ENST00000508343 CENPVL3A0A0U1RRI6 287 aa12.41□□□□□ -0.42
TRIO-211ENST00000508343 F8VVB4 439 aa12.41□□□□□ -0.42
TRIO-211ENST00000508343 F8VWA3 439 aa12.41□□□□□ -0.42
TRIO-211ENST00000508343 INMTO95050 263 aa12.41□□□□□ -0.42
TRIO-211ENST00000508343 ALX3O95076 343 aa12.41□□□□□ -0.42
TRIO-211ENST00000508343 CYB5AP00167 134 aa12.41□□□□□ -0.42
TRIO-211ENST00000508343 CAPZA1P52907 286 aa12.41□□□□□ -0.42
TRIO-211ENST00000508343 CDK5R1Q15078 307 aa12.41□□□□□ -0.42
TRIO-211ENST00000508343 Q8IYB0 196 aa12.41□□□□□ -0.42
TRIO-211ENST00000508343 PARP16Q8N5Y8 322 aa12.41□□□□□ -0.42
TRIO-211ENST00000508343 KIR3DL3Q8N743 410 aa12.41□□□□□ -0.42
TRIO-211ENST00000508343 ZDHHC22Q8N966 263 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms