RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 FAM24BQ8N5W8 94 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF610Q8N9Z0 462 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMEM104Q8NE00 496 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 GJC3Q8NFK1 279 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR10S1Q8NGN2 331 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR10G4Q8NGN3 311 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR2I1PQ8NGU4 316 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR14K1Q8NGZ2 314 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR14L1PQ8NHC6 308 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 FAM213BQ8TBF2 198 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 SLC22A8Q8TCC7 542 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 HAS2Q92819 552 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 BADQ92934 168 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 SPTSSAQ969W0 71 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF524Q96C55 264 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 MARS2Q96GW9 593 aaKnown RBP4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 SHDQ96IW2 340 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 FAM71F1Q96KD3 344 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 OXGR1Q96P68 337 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 TECTBQ96PL2 329 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 LRRC61Q9BV99 259 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 ANGPTL4Q9BY76 406 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 RTN4RQ9BZR6 473 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 FOXQ1Q9C009 403 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 CHST5Q9GZS9 411 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 TCEAL2Q9H3H9 227 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF576Q9H609 170 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 ELL3Q9HB65 397 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF286AQ9HBT8 521 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF160Q9HCG1 818 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 UFSP2Q9NUQ7 469 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 PARPBPQ9NWS1 579 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 MED29Q9NX70 200 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 KIAA1456Q9P272 454 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF391Q9UJN7 358 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 TINAGQ9UJW2 476 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 MMP17Q9ULZ9 603 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 VDAC3Q9Y277 283 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 HDGFL3Q9Y3E1 203 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 LHFPL6Q9Y693 200 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 V9GYS6 101 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 KIF26BQ2KJY2 2108 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 IGLV3-32A0A0A0MS00 114 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 LOC101059948A0A1B0GTJ6 334 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMEM238LA0A1B0GVL6 79 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 hCG_1809904A0A1W2PP81 198 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 A0A1W2PPC4 97 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 A0A1W2PR64 198 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 A0A1W2PRV1 198 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR2W5A6NFC9 320 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF850A8MQ14 1090 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 C10orf142B7Z368 130 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 C9JQL5 133 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF587BE7ETH6 402 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 TSTD3H0UI37 97 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 STMND1H3BQB6 276 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 K7N7A8 449 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 PPP1R2P9O14990 202 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 PRKNO60260 465 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 PITX3O75364 302 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 VAMP5O95183 116 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 TIAF1O95411 115 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 HSPB1P04792 205 aaKnown RBP4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 IGHV4-34P06331 123 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMEM225BP0DP42 221 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 FCGR2AP12318 317 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 NME1P15531 152 aaKnown RBP4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF43P17038 809 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 GABRG2P18507 467 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 SERPINA2P20848 420 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 MSR1P21757 451 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 S100GP29377 79 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 TAGLN2P37802 199 aaKnown RBP4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 HAAOP46952 286 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 CSNK1A1P48729 337 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 RAB4BP61018 213 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 RPS23P62266 143 aaKnown RBP4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 ACY1Q03154 408 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 BAXQ07812 192 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 PNRC1Q12796 327 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 FOXF1Q12946 379 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 MYBPHQ13203 477 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 C1orf61Q13536 156 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMEM187Q14656 261 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 COL19A1Q14993 1142 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR8G1Q15617 311 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF674Q2M3X9 581 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF542PQ5EBM4 170 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR2B11Q5JQS5 317 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 AKR1C8PQ5T2L2 129 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 LCN10Q6JVE6 187 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 Q6ZSR3 168 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 LHFPL2Q6ZUX7 228 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 PLXDC1Q8IUK5 500 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 BHLHE23Q8NDY6 225 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 RTN4IP1Q8WWV3 396 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 MRPL24Q96A35 216 aaKnown RBP4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 INTS12Q96CB8 462 aaKnown RBP4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 TVP23CQ96ET8 276 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 C18orf12Q96KH6 178 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms