RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 FAM90A13PP0C7W8 464 aa15.22■□□□□ 0.03
SFXN1-208ENST00000507823 FAM90A14PP0C7W9 464 aa15.22■□□□□ 0.03
SFXN1-208ENST00000507823 FAM90A24PP0C7X0 464 aa15.22■□□□□ 0.03
SFXN1-208ENST00000507823 OR3A3P47888 321 aa15.22■□□□□ 0.03
SFXN1-208ENST00000507823 ELP2Q6IA86 826 aa15.22■□□□□ 0.03
SFXN1-208ENST00000507823 TMEM65Q6PI78 240 aa15.22■□□□□ 0.03
SFXN1-208ENST00000507823 TMEM200AQ86VY9 491 aa15.22■□□□□ 0.03
SFXN1-208ENST00000507823 BOD1Q96IK1 185 aa15.22■□□□□ 0.03
SFXN1-208ENST00000507823 RTBDNQ9BSG5 229 aaPredicted RBP15.22■□□□□ 0.03
SFXN1-208ENST00000507823 DPCDQ9BVM2 203 aaPredicted RBP15.22■□□□□ 0.03
SFXN1-208ENST00000507823 C12orf49Q9H741 205 aa15.22■□□□□ 0.03
SFXN1-208ENST00000507823 GPR160Q9UJ42 338 aa15.22■□□□□ 0.03
SFXN1-208ENST00000507823 L7N2F9 121 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 RPA2P15927 270 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 GMFBP60983 142 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 PRDX4Q13162 271 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 CEACAM21Q3KPI0 293 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 NHLRC3Q5JS37 347 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 MRPL21Q7Z2W9 205 aaKnown RBP15.21■□□□□ 0.03
SFXN1-208ENST00000507823 CALHM1Q8IU99 346 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 HPSE2Q8WWQ2 592 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 PRRX2Q99811 253 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 IGKV1D-8A0A087WSZ0 117 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 PRSS44E7EML9 344 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 IFNA7P01567 189 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 CCL2P13500 99 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 WNT5AP41221 380 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 ECI1P42126 302 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 RBM11P57052 281 aaKnown RBP15.21■□□□□ 0.03
SFXN1-208ENST00000507823 FGL1Q08830 312 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 TFAP2EQ6VUC0 442 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 FBXL14Q8N1E6 418 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 OR10AD1Q8NGE0 317 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 OR51F2Q8NH61 342 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 AK3Q9UIJ7 227 aa15.21■□□□□ 0.03
SFXN1-208ENST00000507823 ANKRD34BA5PLL1 514 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 CNOT4O95628 575 aaKnown RBP15.2■□□□□ 0.02
SFXN1-208ENST00000507823 NGFP01138 241 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 SLC25A4P12235 298 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 HIKESHIQ53FT3 197 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 ZNF660Q6AZW8 331 aaPredicted RBP15.2■□□□□ 0.02
SFXN1-208ENST00000507823 LIN54Q6MZP7 749 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 ZNF611Q8N823 705 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 SULT4A1Q9BR01 284 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 EHFQ9NZC4 300 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 CRIM1Q9NZV1 1036 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 AUP1Q9Y679 476 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 LINC00862A6NCI5 91 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 GEMIN2O14893 280 aaKnown RBP15.2■□□□□ 0.02
SFXN1-208ENST00000507823 APLNRP35414 380 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 CHRFAM7AQ494W8 412 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 NKAPLQ5M9Q1 402 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 CCDC36Q8IYA8 594 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 ZDHHC23Q8IYP9 409 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 FAAP24Q9BTP7 215 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 ZNF581Q9P0T4 197 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 ANXA10Q9UJ72 324 aa15.2■□□□□ 0.02
SFXN1-208ENST00000507823 PDCD6O75340 191 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 SFT2D2O95562 160 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 PLATP00750 562 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 CCNOP22674 350 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 S100A11P31949 105 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 NPY4RP50391 375 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 EXOSC2Q13868 293 aaKnown RBP15.19■□□□□ 0.02
SFXN1-208ENST00000507823 PIGYQ3MUY2 71 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 PAPOLGQ9BWT3 736 aaKnown RBP15.19■□□□□ 0.02
SFXN1-208ENST00000507823 ST3GAL6Q9Y274 331 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 KCNMB2Q9Y691 235 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 RPS10-NUDT3A0A1W2PQS6 291 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 OR5H14A6NHG9 310 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 FCGR3AP08637 254 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 RPS2P15880 293 aaKnown RBP15.19■□□□□ 0.02
SFXN1-208ENST00000507823 AKR1C4P17516 323 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 SORDQ00796 357 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 HLXQ14774 488 aaPredicted RBP15.19■□□□□ 0.02
SFXN1-208ENST00000507823 TMUB2Q71RG4 321 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 MDP1Q86V88 176 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 OR5A2Q8NGI9 324 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 DHRS9Q9BPW9 319 aa15.19■□□□□ 0.02
SFXN1-208ENST00000507823 HDHD3Q9BSH5 251 aaPredicted RBP15.19■□□□□ 0.02
SFXN1-208ENST00000507823 CACNA1GO43497 2377 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 TUBAL3A6NHL2 446 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 CD300LBA8K4G0 201 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 TPD52L2O43399 206 aaKnown RBP15.18■□□□□ 0.02
SFXN1-208ENST00000507823 CFDP00746 253 aaPredicted RBP15.18■□□□□ 0.02
SFXN1-208ENST00000507823 SUPT4H1P63272 117 aaKnown RBP15.18■□□□□ 0.02
SFXN1-208ENST00000507823 FAM214BQ7L5A3 538 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 P4HA3Q7Z4N8 544 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 MAFIPQ8WZ33 124 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 CMSS1Q9BQ75 279 aaKnown RBP15.18■□□□□ 0.02
SFXN1-208ENST00000507823 DLL3Q9NYJ7 618 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 ARPC5O15511 151 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 ZNF14P17017 642 aaPredicted RBP15.18■□□□□ 0.02
SFXN1-208ENST00000507823 DEFB109BQ30KR1 87 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 CLLU1Q5K131 121 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 SLC25A26Q70HW3 274 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 TMEM165Q9HC07 324 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 ZNF701Q9NV72 531 aaPredicted RBP15.18■□□□□ 0.02
SFXN1-208ENST00000507823 FAM86C1Q9NVL1 165 aa15.18■□□□□ 0.02
SFXN1-208ENST00000507823 UBQLN2Q9UHD9 624 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms