RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 DHRS3O75911 302 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST1H2BJP06899 126 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 SERPINA2P20848 420 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST1H2BOP23527 126 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST1H2BBP33778 126 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 SFTPDP35247 375 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST1H2BDP58876 126 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST1H2BCP62807 126 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST2H2BEQ16778 126 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.51■□□□□ 0.07
NUP54-205ENST00000507257 TMEM182Q6ZP80 229 aaPredicted RBP15.51■□□□□ 0.07
NUP54-205ENST00000507257 REC114Q7Z4M0 266 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 SLC35E3Q7Z769 313 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HSD17B11Q8NBQ5 300 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 OR10G4Q8NGN3 311 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST1H2BHQ93079 126 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 C14orf144Q96I85 54 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 ABHD14BQ96IU4 210 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 MRGPRX4Q96LA9 322 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST1H2BNQ99877 126 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST1H2BMQ99879 126 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 NELFAQ9H3P2 528 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 PLEKHJ1Q9NW61 149 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 B4DEV8 164 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 TRAF3IP2O43734 574 aaPredicted RBP15.51■□□□□ 0.07
NUP54-205ENST00000507257 RAMP1O60894 148 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 TAGLN2P37802 199 aaKnown RBP15.51■□□□□ 0.07
NUP54-205ENST00000507257 EWSR1Q01844 656 aaKnown RBP eCLIP15.51■□□□□ 0.07
NUP54-205ENST00000507257 FOXF1Q12946 379 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 UBE2V2Q15819 145 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 ABCA11PQ4W5N1 156 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 ZNF506Q5JVG8 444 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST2H3PS2Q5TEC6 136 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 CLEC9AQ6UXN8 241 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 C6orf201Q7Z4U5 140 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 LYZL2Q7Z4W2 148 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST3H2BBQ8N257 126 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 Q8WTZ3 238 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 TVP23CQ96ET8 276 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 LIME1Q9H400 295 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 ZNF724A8MTY0 619 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 MSTNO14793 375 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 PPP1R2P9O14990 202 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 RER1O15258 196 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 DIRAS3O95661 229 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 CDS2O95674 445 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 HEXBP07686 556 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 TMEM225BP0DP42 221 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 PAX1P15863 534 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 ANOS1P23352 680 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 GLIPR1P48060 266 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 UBE2KP61086 200 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 LSM6P62312 80 aaKnown RBP15.5■□□□□ 0.07
NUP54-205ENST00000507257 NHLH2Q02577 135 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 GNMTQ14749 295 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 ZNF674Q2M3X9 581 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 Q3ZCU0 254 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 TMEM31Q5JXX7 168 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 KIAA0895LQ68EN5 471 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 TMEM92Q6UXU6 159 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 FBXL14Q8N1E6 418 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 D2HGDHQ8N465 521 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 PGAM5Q96HS1 289 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 LYZL4Q96KX0 146 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 RARRES2Q99969 163 aa15.5■□□□□ 0.07
NUP54-205ENST00000507257 GPR37O15354 613 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 ST8SIA5O15466 376 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 XRCC2O43543 280 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 PTBP3O95758 552 aaKnown RBP15.49■□□□□ 0.07
NUP54-205ENST00000507257 FBLP22087 321 aaKnown RBP15.49■□□□□ 0.07
NUP54-205ENST00000507257 MSX1P28360 303 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 GFERP55789 205 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 RND3P61587 244 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 PKIAP61925 76 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 SRPXP78539 464 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 MFAP5Q13361 173 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 LBHQ53QV2 105 aaPredicted RBP15.49■□□□□ 0.07
NUP54-205ENST00000507257 DPPA3Q6W0C5 159 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 OR5D18Q8NGL1 313 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 OR14L1PQ8NHC6 308 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 M1APQ8TC57 530 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 RCL1Q9Y2P8 373 aaKnown RBP15.49■□□□□ 0.07
NUP54-205ENST00000507257 MMP24Q9Y5R2 645 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 TDRD6O60522 2096 aaKnown RBP15.49■□□□□ 0.07
NUP54-205ENST00000507257 LOC102725191A0A1B0GVB3 256 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 ZNF732B4DXR9 585 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 HSPA12AO43301 675 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 CXCL1P09341 107 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 FCGR2AP12318 317 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 DRD1P21728 446 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 CSNK1A1P48729 337 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 MYBPHQ13203 477 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 OR2C3Q8N628 320 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 PLPP5Q8NEB5 264 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 OR52M1Q8NGK5 317 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 OR10D4PQ8NGN7 298 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 RELTQ969Z4 430 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 RBMXL1Q96E39 390 aaKnown RBP15.49■□□□□ 0.07
NUP54-205ENST00000507257 SLC2A9Q9NRM0 540 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms