RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 TAS2R46P59540 309 aa18.34■□□□□ 0.53
UBE2D3-216ENST00000503742 SNRPD2P62316 118 aaKnown RBP18.34■□□□□ 0.53
UBE2D3-216ENST00000503742 ZNF585AQ6P3V2 769 aa18.34■□□□□ 0.53
UBE2D3-216ENST00000503742 INO80CQ6PI98 192 aaPredicted RBP18.34■□□□□ 0.53
UBE2D3-216ENST00000503742 SLC25A26Q70HW3 274 aa18.34■□□□□ 0.53
UBE2D3-216ENST00000503742 SAXO1Q8IYX7 474 aa18.34■□□□□ 0.53
UBE2D3-216ENST00000503742 NAXEQ8NCW5 288 aa18.34■□□□□ 0.53
UBE2D3-216ENST00000503742 C17orf50Q8WW18 174 aa18.34■□□□□ 0.53
UBE2D3-216ENST00000503742 LHX6Q9UPM6 363 aa18.34■□□□□ 0.53
UBE2D3-216ENST00000503742 ST3GAL6Q9Y274 331 aa18.34■□□□□ 0.53
UBE2D3-216ENST00000503742 GTF3C1Q12789 2109 aa18.34■□□□□ 0.53
UBE2D3-216ENST00000503742 MSTNO14793 375 aa18.33■□□□□ 0.53
UBE2D3-216ENST00000503742 SPINK2P20155 84 aa18.33■□□□□ 0.53
UBE2D3-216ENST00000503742 GPM6AP51674 278 aa18.33■□□□□ 0.53
UBE2D3-216ENST00000503742 H2BFSP57053 126 aa18.33■□□□□ 0.53
UBE2D3-216ENST00000503742 DHRS2Q13268 280 aa18.33■□□□□ 0.53
UBE2D3-216ENST00000503742 SEM1Q6ZVN7 128 aa18.33■□□□□ 0.53
UBE2D3-216ENST00000503742 C1orf162Q8NEQ5 155 aaPredicted RBP18.33■□□□□ 0.53
UBE2D3-216ENST00000503742 OR10AD1Q8NGE0 317 aa18.33■□□□□ 0.53
UBE2D3-216ENST00000503742 OR5A2Q8NGI9 324 aa18.33■□□□□ 0.53
UBE2D3-216ENST00000503742 FAAP24Q9BTP7 215 aa18.33■□□□□ 0.53
UBE2D3-216ENST00000503742 A0A1W2PR80 420 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 MBD3L4A6NDZ8 208 aaPredicted RBP18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 MBD3L3A6NE82 208 aaPredicted RBP18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 MBD3L5A6NJ08 208 aaPredicted RBP18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 LAMA5O15230 3695 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 TNFSF13O75888 250 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 ZBTB25P24278 435 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 RBM11P57052 281 aaKnown RBP18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 FOXC1Q12948 553 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 DAZAP2Q15038 168 aaPredicted RBP18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 MPPED2Q15777 294 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 FAHD2BQ6P2I3 314 aaPredicted RBP18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 TMEM200AQ86VY9 491 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 LHFPL1Q86WI0 220 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 C12orf45Q8N5I9 185 aaPredicted RBP18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 OR5AP2Q8NGF4 316 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 MBD3L2Q8NHZ7 208 aaPredicted RBP18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 MAFIPQ8WZ33 124 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 WDR89Q96FK6 387 aaPredicted RBP18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 FAHD2AQ96GK7 314 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 RADILQ96JH8 1075 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 OR51B6Q9H340 312 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 MPC1Q9Y5U8 109 aa18.33■□□□□ 0.52
UBE2D3-216ENST00000503742 LILRA1O75019 489 aa18.32■□□□□ 0.52
UBE2D3-216ENST00000503742 IL2RAP01589 272 aa18.32■□□□□ 0.52
UBE2D3-216ENST00000503742 NPBWR2P48146 333 aa18.32■□□□□ 0.52
UBE2D3-216ENST00000503742 IDH3GP51553 393 aaPredicted RBP18.32■□□□□ 0.52
UBE2D3-216ENST00000503742 TSC22D1Q15714 1073 aa18.32■□□□□ 0.52
UBE2D3-216ENST00000503742 ELP2Q6IA86 826 aa18.32■□□□□ 0.52
UBE2D3-216ENST00000503742 OR5P3Q8WZ94 311 aa18.32■□□□□ 0.52
UBE2D3-216ENST00000503742 SULT4A1Q9BR01 284 aa18.32■□□□□ 0.52
UBE2D3-216ENST00000503742 HDHD3Q9BSH5 251 aaPredicted RBP18.32■□□□□ 0.52
UBE2D3-216ENST00000503742 AK3Q9UIJ7 227 aa18.32■□□□□ 0.52
UBE2D3-216ENST00000503742 IGKV1D-8A0A087WSZ0 117 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 ZNF732B4DXR9 585 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 SMPD2O60906 423 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 CGAP01215 116 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 HAAOP46952 286 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 MRPL49Q13405 166 aaKnown RBP18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 PLEKHN1Q494U1 663 aaPredicted RBP18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 FBXW12Q6X9E4 464 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 OVCH2Q7RTZ1 564 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 WDR31Q8NA23 367 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 UXS1Q8NBZ7 420 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 MARCH1Q8TCQ1 289 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 GPR137Q96N19 417 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 ANKRD30BLA7E2S9 258 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 GOSR2O14653 212 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 CBR1P16152 277 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 OR3A3P47888 321 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 LYG2Q86SG7 212 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 BHLHE23Q8NDY6 225 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 OR13G1Q8NGZ3 307 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 STARD4Q96DR4 205 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 ZNF701Q9NV72 531 aaPredicted RBP18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 OPN4Q9UHM6 478 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 GPR132Q9UNW8 380 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 OSGIN2Q9Y236 505 aa18.31■□□□□ 0.52
UBE2D3-216ENST00000503742 PDCD6O75340 191 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 TOXO94900 526 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 SIX6O95475 246 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 DTYMKP23919 212 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 DHODHQ02127 395 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 PPP1R1AQ13522 171 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 OR2T2Q6IF00 324 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 ADAD2Q8NCV1 583 aaKnown RBP18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 HIST1H2AAQ96QV6 131 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 CDH20Q9HBT6 801 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 EDARQ9UNE0 448 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 FAM90A10PA6NDY2 464 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 FAM90A18PA6NE21 464 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 FAM90A16PA6NEW6 464 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 FAM90A20PA6NIJ5 464 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 FAM90A8PA6NJQ4 464 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 FAM90A7PA6NKC0 464 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 FAM90A22PA8MWA6 464 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 FAM90A12PA8MX19 464 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 FAM90A5PA8MXJ8 464 aa18.3■□□□□ 0.52
UBE2D3-216ENST00000503742 FAM90A23PA8MXZ1 464 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms