RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 STK40Q8N2I9 435 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 OR5AP2Q8NGF4 316 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 OR13A1Q8NGR1 328 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 OR8U1Q8NH10 309 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 DNASE2BQ8WZ79 361 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 ELSPBP1Q96BH3 223 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 TLCD1Q96CP7 247 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 UBE2E2Q96LR5 201 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 PRAP1Q96NZ9 151 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 OLFM3Q96PB7 478 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 PGLYRP2Q96PD5 576 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 GPR22Q99680 433 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 TBL1YQ9BQ87 522 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 KIFC1Q9BW19 673 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 OSBPL11Q9BXB4 747 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 NXF2Q9GZY0 626 aaKnown RBP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 REEP1Q9H902 201 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 PLGRKTQ9HBL7 147 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 KCNJ16Q9NPI9 418 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 TMEM9BQ9NQ34 198 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 EXOSC3Q9NQT5 275 aaKnown RBP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 FBXO8Q9NRD0 319 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 OPN4Q9UHM6 478 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 STOML2Q9UJZ1 356 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 MMACHCQ9Y4U1 282 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 DENND4CQ5VZ89 1909 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 CNOT1A5YKK6 2376 aaKnown RBP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 RALGAPA1Q6GYQ0 2036 aa3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 PHF3Q92576 2039 aaKnown RBP3.46□□□□□ -1.86
HMGB1P21-201ENST00000502313 OBSL1O75147 1896 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 USP24Q9UPU5 2620 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 KMT2BQ9UMN6 2715 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 TPRP12270 2363 aaKnown RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 ITPR1Q14643 2758 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 FANCMQ8IYD8 2048 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 LOC285095A0A1B0GVY8 99 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 ISPDA4D126 451 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 NCBP2LA6PVI3 153 aaKnown RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 G3V3Y1 287 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 KCNK1O00180 336 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CDIPTO14735 213 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CCL16O15467 120 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 NUPL2O15504 423 aaKnown RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 MGRN1O60291 552 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CDC40O60508 579 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 SLC16A7O60669 478 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 DPM1O60762 260 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 NXPH4O95158 308 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 HLA-AP01891 365 aaKnown RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CT45A6P0DMU7 189 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CT45A5P0DMU8 189 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CT45A7P0DMV0 189 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 UGT2B7P16662 529 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 USF1P22415 310 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CFL1P23528 166 aaKnown RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 SHMT2P34897 504 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 GPX4P36969 197 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 SLCO1A2P46721 670 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 OR1D4P47884 311 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 TTPAP49638 278 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 APOC4P55056 127 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 ZNF121P58317 390 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 DSCR9P59020 149 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 ERVK-16P61578 105 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CCL7P80098 99 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 BCL2L1Q07817 233 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 KIAA0141Q14154 515 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 KIAA1644Q3SXP7 199 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 TNFAIP8L3Q5GJ75 292 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CT45A1Q5HYN5 189 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 MUC21Q5SSG8 566 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 METTL21CQ5VZV1 264 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CASP12Q6UXS9 341 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 Q6ZN92 141 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 SH2D5Q6ZV89 423 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 PRSS41Q7RTY9 318 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 TRPT1Q86TN4 253 aaKnown RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 TAC4Q86UU9 113 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 PRSS58Q8IYP2 241 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CT45A3Q8NHU0 189 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 MCOLN3Q8TDD5 553 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 C11orf52Q96A22 123 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 IMP4Q96G21 291 aaKnown RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 PGLYRP4Q96LB8 373 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 TMEM56Q96MV1 263 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 PEBP4Q96S96 227 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 TSNAXQ99598 290 aaKnown RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 TMEM208Q9BTX3 173 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 MRPS26Q9BYN8 205 aaKnown RBP3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 SLC19A3Q9BZV2 496 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 ARL6Q9H0F7 186 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 SH2D2AQ9NP31 389 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 TMEM181Q9P2C4 612 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 BTNL2Q9UIR0 455 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CES1P1Q9UKY3 287 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 CCL26Q9Y258 94 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 AP3M1Q9Y2T2 418 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 ARL2BPQ9Y2Y0 163 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 KLF12Q9Y4X4 402 aa3.45□□□□□ -1.86
HMGB1P21-201ENST00000502313 USH1CQ9Y6N9 552 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms