RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 LPAR5Q9H1C0 372 aa6.55□□□□□ -1.36
CDC42-205ENST00000498236 KCNK15Q9H427 330 aa6.55□□□□□ -1.36
CDC42-205ENST00000498236 AUNIPQ9H7T9 357 aa6.55□□□□□ -1.36
CDC42-205ENST00000498236 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.55□□□□□ -1.363e-6■□□□□ 8
CDC42-205ENST00000498236 PCDHB16Q9NRJ7 776 aa6.55□□□□□ -1.36
CDC42-205ENST00000498236 FAIMQ9NVQ4 179 aa6.55□□□□□ -1.36
CDC42-205ENST00000498236 RBFOX1Q9NWB1 397 aaKnown RBP6.55□□□□□ -1.36
CDC42-205ENST00000498236 MTFP1Q9UDX5 166 aa6.55□□□□□ -1.36
CDC42-205ENST00000498236 ZNF107Q9UII5 783 aaPredicted RBP6.55□□□□□ -1.36
CDC42-205ENST00000498236 ZZEF1O43149 2961 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 TRAV18A0A075B6X5 111 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 FAM230AA0A1W2PPH8 454 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 OR5B21A6NL26 309 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 FOXI3A8MTJ6 420 aaPredicted RBP6.54□□□□□ -1.36
CDC42-205ENST00000498236 IQCF6A8MYZ5 107 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 PRSS44E7EML9 344 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 LYRM1O43325 122 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 ORC5O43913 435 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 AGFG2O95081 481 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 LPLP06858 475 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 GSTT2BP0CG30 244 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 PPP3CBP16298 524 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 KITLGP21583 273 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 CCKARP32238 428 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 PRSS3P35030 304 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 NAAAQ02083 359 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 FAM27E3Q08E93 113 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 PDZK1IP1Q13113 114 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 MADCAM1Q13477 382 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 KLF9Q13886 244 aaPredicted RBP6.54□□□□□ -1.36
CDC42-205ENST00000498236 ARL6IP1Q15041 203 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 TAB1Q15750 504 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 FBXL19-AS1Q494R0 122 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 CT83Q5H943 113 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 OR10K2Q6IF99 312 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 CCBE1Q6UXH8 406 aaPredicted RBP6.54□□□□□ -1.36
CDC42-205ENST00000498236 C1QL2Q7Z5L3 287 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 NRARPQ7Z6K4 114 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 IZUMO1Q8IYV9 350 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 TOMM5Q8N4H5 51 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 DTX3Q8N9I9 347 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 TMEM104Q8NE00 496 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 DUSP18Q8NEJ0 188 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 OR56B1Q8NGI3 324 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 OR1J1Q8NGS3 322 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 OR10R2Q8NGX6 335 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 OR52I2Q8NH67 350 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 SLC25A40Q8TBP6 338 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 GPX8Q8TED1 209 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 NPRL2Q8WTW4 380 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 HPSE2Q8WWQ2 592 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 CMBLQ96DG6 245 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 HIST1H2AAQ96QV6 131 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 OR2J1Q9GZK6 312 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 METTL9Q9H1A3 318 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 DLL4Q9NR61 685 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 TAS2R8Q9NYW2 309 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 DSPP15924 2871 aaKnown RBP6.54□□□□□ -1.36
CDC42-205ENST00000498236 SPTA1P02549 2419 aa6.54□□□□□ -1.36
CDC42-205ENST00000498236 POLEQ07864 2286 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 TRGV8A0A0C4DH27 118 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 ANKRD20A5PA0PJZ0 165 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 NAP1L6A6NFF2 107 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 WIPF3A6NGB9 483 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 CENPXA8MT69 81 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 CA11O75493 328 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 CRTAPO75718 401 aaPredicted RBP6.53□□□□□ -1.36
CDC42-205ENST00000498236 RBBP9O75884 186 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 CRYAAP02489 173 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 CD3GP09693 182 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 TMEM225BP0DP42 221 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 GTF2F2P13984 249 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 ZNF250P15622 560 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 MGMTP16455 207 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 CPT2P23786 658 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 MPZP25189 248 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 SLC6A1P30531 599 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 CHRNB4P30926 498 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 CALCRP30988 508 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 ACTBP60709 375 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 GNG3P63215 75 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 ACTG1P63261 375 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 NKX6-1P78426 367 aaPredicted RBP6.53□□□□□ -1.36
CDC42-205ENST00000498236 PSG7Q13046 419 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 LY6DQ14210 128 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 RSU1Q15404 277 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 PNLIPRP3Q17RR3 467 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 ZNF718Q3SXZ3 478 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 MOGAT2Q3SYC2 334 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 ZNF260Q3ZCT1 412 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 SLC22A6Q4U2R8 563 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 FAM76BQ5HYJ3 339 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 NHLRC3Q5JS37 347 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 ZNF57Q68EA5 555 aaPredicted RBP6.53□□□□□ -1.36
CDC42-205ENST00000498236 ELP2Q6IA86 826 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 OR2T2Q6IF00 324 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 ZNF573Q86YE8 665 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 OR5D18Q8NGL1 313 aa6.53□□□□□ -1.36
CDC42-205ENST00000498236 KLF14Q8TD94 323 aaPredicted RBP6.53□□□□□ -1.36
CDC42-205ENST00000498236 SEH1LQ96EE3 360 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms