RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 HSPB2A8KAH6 182 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 CLDN34H7C241 214 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 DVL1O14640 695 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 CHRM2P08172 466 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 RAB4AP20338 218 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 HNF4GQ14541 408 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 GNMTQ14749 295 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 HSPB2Q16082 182 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 TEX38Q6PEX7 206 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 CRIPAKQ8N1N5 446 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 OR5T1Q8NG75 326 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 OR1P1Q8NH06 330 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 DGAT2Q96PD7 388 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 HIST1H2AAQ96QV6 131 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 ZBP1Q9H171 429 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 FGF22Q9HCT0 170 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 GPR173Q9NS66 373 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 CFAP54Q96N23 3096 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 ZNF850A8MQ14 1090 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 DLEU1O43261 78 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 CEACAM5P06731 702 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 CT45A8P0DMV1 189 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 CT45A9P0DMV2 189 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 HSD17B7P56937 341 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 H3F3AP84243 136 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 CT45A2Q5DJT8 189 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 URM1Q9BTM9 101 aaKnown RBP11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 CXorf51AA0A1B0GTR3 108 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 TCF21O43680 179 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 GSTP1P09211 210 aaKnown RBP11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 SLC35E2P0CK97 266 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 TAS2R46P59540 309 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 ICAM4Q14773 271 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 ADIRFQ15847 76 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 KCNG3Q8TAE7 436 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 CAPNS2Q96L46 248 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 CDCA3Q99618 268 aaPredicted RBP11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 ELOVL1Q9BW60 279 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 BGLAPP02818 100 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 CD55P08174 381 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 AKT2P31751 481 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 ROM1Q03395 351 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 SMAD4Q13485 552 aaKnown RBP11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 HERPUD1Q15011 391 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 MPV17LQ2QL34 196 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 ETFRF1Q6IPR1 90 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 LCN15Q6UWW0 184 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 OR13D1Q8NGV5 346 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 NT5CQ8TCD5 201 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 CTHRC1Q96CG8 243 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 OR10A2Q9H208 303 aa11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 SPTBN5Q9NRC6 3674 aaKnown RBP11.5□□□□□ -0.57
GAPVD1-220ENST00000497580 IGLV1-36A0A0B4J1U3 117 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 TMEM14DPA8MWL7 114 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 H0YIG0 161 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 ST8SIA3O43173 380 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 HCRTR1O43613 425 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 TDGF1P3P51864 188 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 TAF9Q16594 264 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 CMTM1Q8IZ96 169 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 ARL6IP6Q8N6S5 226 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 ZNF248Q8NDW4 579 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 OR14L1PQ8NHC6 308 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 SHDQ96IW2 340 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 EMC6Q9BV81 110 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 SUSD2Q9UGT4 822 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 RP1P56715 2156 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 TTRP02766 147 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 CISD3P0C7P0 127 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 POLR2HP52434 150 aaKnown RBP11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 QRFPP83859 136 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 EWSR1Q01844 656 aaKnown RBP eCLIP11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 C6orf201Q7Z4U5 140 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 NUDT22Q9BRQ3 303 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 FAAP24Q9BTP7 215 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 PBOV1Q9GZY1 135 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 MED29Q9NX70 200 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 A0A1W2PPQ1 181 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 TM4SF4P48230 202 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 RRADP55042 308 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 FGF8P55075 233 aaPredicted RBP11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 TRA2AQ13595 282 aaKnown RBP eCLIP11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 ARSJQ5FYB0 599 aaPredicted RBP11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 SPSB3Q6PJ21 355 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 BEND2Q8NDZ0 799 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 OR10A5Q9H207 317 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 LYRM4Q9HD34 91 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 SEMA5BQ9P283 1151 aa11.49□□□□□ -0.57
GAPVD1-220ENST00000497580 UCP2P55851 309 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 PPP1CAP62136 330 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 MRPS34P82930 218 aaKnown RBP11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 ZNF296Q8WUU4 475 aaPredicted RBP11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 RTN4IP1Q8WWV3 396 aaPredicted RBP11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 OR8D2Q9GZM6 311 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 DKKL1Q9UK85 242 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 COL4A6Q14031 1691 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 A0A087WWC5 75 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 TGFBR3LH3BV60 316 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 PHF1O43189 567 aaPredicted RBP11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 HLA-HP01893 362 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms