RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CRYAAP02489 173 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H2ABP04908 130 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 NGFRP08138 427 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 NHLRC4P0CG21 123 aaPredicted RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 OR12D1P0DN82 309 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 CD1CP29017 333 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF84P51523 738 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 DLX6P56179 175 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 RPS15AP62244 130 aaKnown RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 FKBP1BP68106 108 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 MFAP5Q13361 173 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 EDDM3AQ14507 147 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 TBC1D28Q2M2D7 210 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 LRRC75BQ2VPJ9 315 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 DCAF4L1Q3SXM0 396 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF776Q68DI1 518 aaPredicted RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 RTL6Q6ICC9 239 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST3H2AQ7L7L0 130 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 TMPRSS11BQ86T26 416 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 TMPRSS12Q86WS5 348 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 CHSY1Q86X52 802 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 MEX3DQ86XN8 651 aaKnown RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 APRG1Q8IVJ8 170 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 MUC20Q8N307 709 aaPredicted RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 EID2Q8N6I1 236 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 BOLLQ8N9W6 283 aaKnown RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 OR4K5Q8NGD3 323 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 OR56A4Q8NGH8 313 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 OR5K2Q8NHB8 316 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF519Q8TB69 540 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 GPR148Q8TDV2 347 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 OR5P2Q8WZ92 322 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 RNF183Q96D59 192 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 OXGR1Q96P68 337 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 SIGLEC12Q96PQ1 595 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 CLCC1Q96S66 551 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 NDFIP1Q9BT67 221 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ADAT1Q9BUB4 502 aaKnown RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 MAP1LC3AQ9H492 121 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 RNF167Q9H6Y7 350 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ZDHHC11Q9H8X9 412 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 GPR35Q9HC97 309 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 HINT3Q9NQE9 182 aaKnown RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 TBX21Q9UL17 535 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 FLVCR1Q9Y5Y0 555 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 E9PCH4 1651 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 COL1A2P08123 1366 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ROBO3Q96MS0 1386 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 DISP2A7MBM2 1401 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A0D9SG52 128 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 KIR2DS5A0A0G2JLQ3 304 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 PRAMEF33A0A0G2JMD5 474 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A0G2JNG1 304 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 LOC100130705A0A1B0GUX0 176 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 GAGE12BA1L429 117 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 C7orf66A4D0T2 115 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 LRP5LA4QPB2 252 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ASPDHA6ND91 283 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 F5H5K5 113 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 J3QR89 54 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 PLPP3O14495 311 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 PTGESO14684 152 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 PRAMEF10O60809 474 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 MT-CO3P00414 261 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 CT62P0C5K7 136 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 PRSS56P0CW18 603 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 PSG2P11465 335 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 CREB1P16220 341 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 HOXB9P17482 250 aaPredicted RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ADCYAP1P18509 176 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 TCN2P20062 427 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 MAOAP21397 527 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 HTR1EP28566 365 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ELK3P41970 407 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 GNG4P50150 75 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 TIMM10P62072 90 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ZXDBP98169 803 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 PSG4Q00888 419 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H1AQ02539 215 aaPredicted RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 BCL2L1Q07817 233 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 HSD52Q0P140 79 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 KIR2DS5Q14953 304 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 C3AR1Q16581 482 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 SLC25A52Q3SY17 297 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 OR10J3Q5JRS4 329 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ACTL10Q5JWF8 245 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 C6orf141Q5SZD1 244 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 OTUD3Q5T2D3 398 aaPredicted RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 GRHL2Q6ISB3 625 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF343Q6P1L6 599 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST2H3AQ71DI3 136 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 MEPCEQ7L2J0 689 aaKnown RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 PRSS45Q7RTY3 260 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ACOT1Q86TX2 421 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 GPSM1Q86YR5 675 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 DEFB107AQ8IZN7 70 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 BEST3Q8N1M1 668 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 C5orf17Q8NAS9 161 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF485Q8NCK3 441 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 OR52I1Q8NGK6 324 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms