RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 RAB38P57729 211 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 SYCNQ0VAF6 134 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 ADIGQ0VDE8 80 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 PMVKQ15126 192 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 ZNF658BQ4V348 819 aaPredicted RBP2.76□□□□□ -1.97
CMSS1-207ENST00000494412 C2orf83Q53S99 150 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 OR10J3Q5JRS4 329 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 UGT2A3Q6UWM9 527 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 SSX7Q7RTT5 188 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 SLC16A13Q7RTY0 426 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 MRPL52Q86TS9 123 aaKnown RBP2.76□□□□□ -1.97
CMSS1-207ENST00000494412 PLCZ1Q86YW0 608 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 BBS7Q8IWZ6 715 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 CCNYL1Q8N7R7 359 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 ATP6V1C2Q8NEY4 427 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 RNASEH2CQ8TDP1 164 aaKnown RBP2.76□□□□□ -1.97
CMSS1-207ENST00000494412 RORBQ92753 470 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 SMARCD1Q96GM5 515 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 SNF8Q96H20 258 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 ZNF414Q96IQ9 312 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 C18orf15Q96N68 181 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 CDX2Q99626 313 aaPredicted RBP2.76□□□□□ -1.97
CMSS1-207ENST00000494412 ZNF251Q9BRH9 671 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 RSG1Q9BU20 258 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 SHCBP1LQ9BZQ2 653 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 DSN1Q9H410 356 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 ABCB9Q9NP78 766 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 UBAP1Q9NZ09 502 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 ZNRD1Q9P1U0 126 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 USH1CQ9Y6N9 552 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 ABCA10Q8WWZ4 1543 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 NOTCH3Q9UM47 2321 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 UHRF1BP1LA0JNW5 1464 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 CDC42BPBQ9Y5S2 1711 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 UACAQ9BZF9 1416 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 ADAMTS9Q9P2N4 1935 aa2.76□□□□□ -1.97
CMSS1-207ENST00000494412 RNF17Q9BXT8 1623 aaKnown RBP2.75□□□□□ -1.97
CMSS1-207ENST00000494412 NUP214P35658 2090 aaPredicted RBP2.75□□□□□ -1.97
CMSS1-207ENST00000494412 ABCB11O95342 1321 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 ZFYVE16Q7Z3T8 1539 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 ARHGEF12Q9NZN5 1544 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 KDM5BQ9UGL1 1544 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 TP53BP1Q12888 1972 aaPredicted RBP2.75□□□□□ -1.97
CMSS1-207ENST00000494412 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.75□□□□□ -1.97
CMSS1-207ENST00000494412 IGHV6-1A0A0B4J1U7 121 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 A0A1B0GTI1 187 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 A0A1B0GX12 115 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 TMEM223A0PJW6 202 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 FABP12A6NFH5 140 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 H0YJW9 148 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 SOCS1O15524 211 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 FABP7O15540 132 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 OCMP0CE72 109 aaPredicted RBP2.75□□□□□ -1.97
CMSS1-207ENST00000494412 PET100P0DJ07 73 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 MNAT1P51948 309 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 OR10A3P58181 314 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 CD164Q04900 197 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 LOXL1Q08397 574 aaPredicted RBP2.75□□□□□ -1.97
CMSS1-207ENST00000494412 PIGHQ14442 188 aaPredicted RBP2.75□□□□□ -1.97
CMSS1-207ENST00000494412 DEFB116Q30KQ4 102 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 RBM48Q5RL73 367 aaKnown RBP2.75□□□□□ -1.97
CMSS1-207ENST00000494412 CLEC19AQ6UXS0 136 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 NTM-AS1Q6ZSK4 140 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 SPICQ8N5J4 248 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 CYB561D1Q8N8Q1 229 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 OR4M2Q8NGB6 313 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 OR4M1Q8NGD0 313 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 BLNKQ8WV28 456 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 NELFBQ8WX92 580 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 C22orf15Q8WYQ4 148 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 RBMXL1Q96E39 390 aaKnown RBP2.75□□□□□ -1.97
CMSS1-207ENST00000494412 RILPQ96NA2 401 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 NDFIP1Q9BT67 221 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 NUDT9Q9BW91 350 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 NXF2Q9GZY0 626 aaKnown RBP2.75□□□□□ -1.97
CMSS1-207ENST00000494412 C1orf109Q9NX04 203 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 LRRC42Q9Y546 428 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 PUS1Q9Y606 427 aaKnown RBP eCLIP2.75□□□□□ -1.97
CMSS1-207ENST00000494412 CCDC88BA6NC98 1476 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 SHANK2Q9UPX8 1470 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 NHSL1Q5SYE7 1610 aa2.75□□□□□ -1.97
CMSS1-207ENST00000494412 CDK12Q9NYV4 1490 aaPredicted RBP2.74□□□□□ -1.97
CMSS1-207ENST00000494412 CCL15-CCL14A0A0B4J2E2 113 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 KIR2DS1A0A191URI9 304 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 WI2-2373I1.2A0A1W2PRP0 233 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 TMEM213A2RRL7 107 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 RBFOX3A6NFN3 312 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 BPY2O14599 106 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 ITGB1BP1O14713 200 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 UBDO15205 165 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 AQP9O43315 295 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 E2F6O75461 281 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 GATBO75879 557 aaKnown RBP2.74□□□□□ -1.97
CMSS1-207ENST00000494412 IGHV3-11P01762 117 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 RLN2P04090 185 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 ZNF3P17036 446 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 PRSS3P35030 304 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 RPL10AP62906 217 aaKnown RBP2.74□□□□□ -1.97
CMSS1-207ENST00000494412 GRB2P62993 217 aaKnown RBP2.74□□□□□ -1.97
CMSS1-207ENST00000494412 ZNHIT3Q15649 155 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms