RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ZNF273Q14593 569 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 GSG1Q2KHT4 349 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 NCMAPQ5T1S8 102 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 ZNF683Q8IZ20 524 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 DYNLRB2Q8TF09 96 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 FLYWCH2Q96CP2 140 aaKnown RBP7.05□□□□□ -1.28
BRCA1-221ENST00000493795 CACNG5Q9UF02 275 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 PLEKHB1Q9UF11 243 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-221ENST00000493795 MAP2P11137 1827 aaKnown RBP7.05□□□□□ -1.28
BRCA1-221ENST00000493795 A0A1W2PPC4 97 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 hADV38S2A0JD32 116 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 H0YIG0 161 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 INHBBP09529 407 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 YBX1P67809 324 aaKnown RBP7.05□□□□□ -1.28
BRCA1-221ENST00000493795 IL24Q13007 206 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 SP6Q3SY56 376 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 C10orf126Q8N4M7 172 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 NUDT10Q8NFP7 164 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 BCL7CQ8WUZ0 217 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-221ENST00000493795 EID2BQ96D98 161 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 SNRNP40Q96DI7 357 aaKnown RBP7.05□□□□□ -1.28
BRCA1-221ENST00000493795 NUDT11Q96G61 164 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 ADTRPQ96IZ2 230 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 CHRNA10Q9GZZ6 450 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 KLK11Q9UBX7 282 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 ERRFI1Q9UJM3 462 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-221ENST00000493795 VSIG4Q9Y279 399 aa7.05□□□□□ -1.28
BRCA1-221ENST00000493795 ZNF815PA8K554 130 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 C11orf94C9JXX5 98 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 B3GALT4O96024 378 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 CRYABP02511 175 aaKnown RBP7.04□□□□□ -1.28
BRCA1-221ENST00000493795 SMIM18P0DKX4 95 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 COX7A1P24310 79 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 SUMO3P55854 103 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-221ENST00000493795 PAFAH1B2P68402 229 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 DNLZQ5SXM8 178 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 AFMIDQ63HM1 303 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 FBXO46Q6PJ61 603 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-221ENST00000493795 MAMSTRQ6ZN01 415 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 TMEM183AQ8IXX5 376 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 ZNF738Q8NE65 137 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 OR8D4Q8NGM9 314 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 VSTM2AQ8TAG5 236 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 RPS4Y2Q8TD47 263 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 VN1R1Q9GZP7 353 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 PRSS50Q9UI38 385 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 CDC42EP3Q9UKI2 254 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 SOX21Q9Y651 276 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-221ENST00000493795 KIAA1210Q9ULL0 1709 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 FRG2CA6NGY1 282 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 PTGFRP43088 359 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 ZXDAP98168 799 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 SPINK9Q5DT21 86 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 VWA2Q5GFL6 755 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 ARL6IP6Q8N6S5 226 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 SPACA9Q96E40 222 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-221ENST00000493795 FGF20Q9NP95 211 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-221ENST00000493795 THAP10Q9P2Z0 257 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-221ENST00000493795 SOCS7O14512 581 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 NDUFB6O95139 128 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 SIGIRRQ6IA17 410 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 CXorf67Q86X51 503 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-221ENST00000493795 OR2C3Q8N628 320 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 OR2A5Q96R48 311 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 FOXB1Q99853 325 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 ZNF385DQ9H6B1 395 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 B9D1Q9UPM9 204 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 PDE6DO43924 150 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 GNG7O60262 68 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 GP1BAP07359 652 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 BRS3P32247 399 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 PNLIPRP2P54317 469 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 KCNAB1Q14722 419 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 FAM74A3Q4VXF1 159 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 KHDC3LQ587J8 217 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 TMEM215Q68D42 235 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 JMJD6Q6NYC1 403 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-221ENST00000493795 MRPL54Q6P161 138 aaKnown RBP7.04□□□□□ -1.28
BRCA1-221ENST00000493795 BVESQ8NE79 360 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 PTX4Q96A99 478 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 YIPF6Q96EC8 236 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 PDXPQ96GD0 296 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 C11orf68Q9H3H3 251 aaKnown RBP7.04□□□□□ -1.28
BRCA1-221ENST00000493795 CSNK1G1Q9HCP0 422 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 LINC01387J3KSC0 135 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 HAND1O96004 215 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 PSG5Q15238 335 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 C11orf91Q3C1V1 193 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 SLC25A35Q3KQZ1 300 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 SPANXN1Q5VSR9 72 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 KMT5CQ86Y97 462 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 CA13Q8N1Q1 262 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 SPICQ8N5J4 248 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 OR4C3Q8NH37 302 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 OR4S2Q8NH73 311 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 PLPPR2Q96GM1 343 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 RASL11BQ9BPW5 248 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 ISG20L2Q9H9L3 353 aaKnown RBP7.04□□□□□ -1.28
BRCA1-221ENST00000493795 LTB4R2Q9NPC1 389 aa7.04□□□□□ -1.28
BRCA1-221ENST00000493795 PPT2Q9UMR5 302 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms