RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 FAM27D1Q5T7N8 215 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 KCTD16Q68DU8 428 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 WDR59Q6PJI9 974 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 FAM131AQ6UXB0 335 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 CLEC18BQ6UXF7 455 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 PDPNQ86YL7 162 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 LRRC8AQ8IWT6 810 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 FAM184AQ8NB25 1140 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 OR4K2Q8NGD2 314 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 DERL3Q96Q80 235 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 CFL2Q9Y281 166 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 KLF13Q9Y2Y9 288 aaPredicted RBP1.63□□□□□ -2.15
SMC4-223ENST00000493695 CHTOPQ9Y3Y2 248 aaKnown RBP1.63□□□□□ -2.15
SMC4-223ENST00000493695 ZBED9Q6R2W3 1325 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 SDK2Q58EX2 2172 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 LOC100653049A0A140TA62 436 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 H7C2Y5 167 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 ALOX12BO75342 701 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 KRT34O76011 436 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 KCNK2O95069 426 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 OTCP00480 354 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 TRMT10CQ7L0Y3 403 aaKnown RBP1.62□□□□□ -2.15
SMC4-223ENST00000493695 PRNTQ86SH4 94 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 ITLN2Q8WWU7 325 aaPredicted RBP1.62□□□□□ -2.15
SMC4-223ENST00000493695 CENPNQ96H22 339 aaPredicted RBP1.62□□□□□ -2.15
SMC4-223ENST00000493695 RNF170Q96K19 258 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 TMED9Q9BVK6 235 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 PRO0628Q9UI54 55 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 ACOT9Q9Y305 439 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 KPTNQ9Y664 436 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 ENPP4Q9Y6X5 453 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 NACADO15069 1562 aa1.62□□□□□ -2.15
SMC4-223ENST00000493695 BAZ1BQ9UIG0 1483 aaKnown RBP1.62□□□□□ -2.15
SMC4-223ENST00000493695 FAM240AA0A1B0GVK7 77 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 GSTTP1A0A1W2PQM5 241 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 M0R1B8 84 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 SNRPAP09012 282 aaKnown RBP1.61□□□□□ -2.15
SMC4-223ENST00000493695 ZNF35P13682 527 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 PSMB2P49721 201 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 BAMBIQ13145 260 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 DUPD1Q68J44 220 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 HCP5Q6MZN7 132 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 FAM231DQ6ZW35 169 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 CA13Q8N1Q1 262 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 ZNF321PQ8N8H1 164 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 OR4D6Q8NGJ1 314 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 OR4C13Q8NGP0 309 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 OR8K3Q8NH51 312 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 NT5CQ8TCD5 201 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 KIAA1143Q96AT1 154 aaPredicted RBP1.61□□□□□ -2.15
SMC4-223ENST00000493695 YIPF6Q96EC8 236 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 RILPQ96NA2 401 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 COA1Q9GZY4 146 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 C6orf50Q9HD87 102 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 ABCB9Q9NP78 766 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 TMEM38BQ9NVV0 291 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 SLC22A7Q9Y694 548 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 PLXNB3Q9ULL4 1909 aa1.61□□□□□ -2.15
SMC4-223ENST00000493695 TMEM131Q92545 1883 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 SETD1AO15047 1707 aaKnown RBP1.6□□□□□ -2.15
SMC4-223ENST00000493695 NOS1P29475 1434 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 IGKV1OR2-108A0A075B7D4 117 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 GMNCA6NCL1 334 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 IGLL5B9A064 214 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 ZNF593O00488 134 aaPredicted RBP1.6□□□□□ -2.15
SMC4-223ENST00000493695 KLHL2O95198 593 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 IGLV6-57P01721 117 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 SEC11BP0C7V7 166 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 HOXB8P17481 243 aaPredicted RBP1.6□□□□□ -2.15
SMC4-223ENST00000493695 LAMTOR4Q0VGL1 99 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 BIKQ13323 160 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 DYNC1I2Q13409 638 aaKnown RBP1.6□□□□□ -2.15
SMC4-223ENST00000493695 PMVKQ15126 192 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 ZNF470Q6ECI4 717 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 CLEC19AQ6UXS0 136 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 USP50Q70EL3 339 aaPredicted RBP1.6□□□□□ -2.15
SMC4-223ENST00000493695 ARHGAP18Q8N392 663 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 RPRMLQ8N4K4 120 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 ZDHHC22Q8N966 263 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 OR5H2Q8NGV7 314 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 PKMYT1Q99640 499 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 THTPAQ9BU02 230 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 MAP1LC3CQ9BXW4 147 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 SHCBP1LQ9BZQ2 653 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 TSGA10Q9BZW7 698 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 GAL3ST2Q9H3Q3 398 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 PRORYQ9H606 182 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 ASB7Q9H672 318 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 VSIRQ9H7M9 311 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 LZTFL1Q9NQ48 299 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 INIPQ9NRY2 104 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 DDIT4Q9NX09 232 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 IFNKQ9P0W0 207 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 ORC6Q9Y5N6 252 aa1.6□□□□□ -2.15
SMC4-223ENST00000493695 ADAMTSL3P82987 1691 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 C9JQL5 133 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 C15orf65H3BRN8 121 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 NRASP01111 189 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 HRASP01112 189 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 KRASP01116 189 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms