RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 ZNF573Q86YE8 665 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 MRPL41Q8IXM3 137 aaKnown RBP11.14□□□□□ -0.63
VARS-227ENST00000489979 OR51E1Q8TCB6 317 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 DGCR6LQ9BY27 220 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 HES4Q9HCC6 221 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 GPR84Q9NQS5 396 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 FAM206AQ9NX38 181 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.14□□□□□ -0.63
VARS-227ENST00000489979 ENPP5Q9UJA9 477 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 SLC22A13Q9Y226 551 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 POLDIP2Q9Y2S7 368 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 U3KQK5 164 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 IGHV2-26A0A0B4J1V2 119 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 SH2D7A6NKC9 451 aaPredicted RBP11.13□□□□□ -0.63
VARS-227ENST00000489979 SASH3O75995 380 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 NRASP01111 189 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 CCDC159P0C7I6 412 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 NHLRC4P0CG21 123 aaPredicted RBP11.13□□□□□ -0.63
VARS-227ENST00000489979 H2AFXP16104 143 aaPredicted RBP11.13□□□□□ -0.63
VARS-227ENST00000489979 PLBD1Q6P4A8 553 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 ETV3LQ6ZN32 361 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 GDPD3Q7L5L3 318 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 TCF23Q7RTU1 214 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 ZNF676Q8N7Q3 588 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 TEX47Q8TBZ9 253 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 CAPSLQ8WWF8 208 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 AKR1E2Q96JD6 320 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 ZNF714Q96N38 554 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 TEAD3Q99594 435 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 ZNF649Q9BS31 505 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 PBOV1Q9GZY1 135 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 LIN7BQ9HAP6 207 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 GPR173Q9NS66 373 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 VNN3Q9NY84 501 aa11.13□□□□□ -0.63
VARS-227ENST00000489979 TMEM269A0A1B0GVZ9 245 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 ACOD1A6NK06 481 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 PSMD9O00233 223 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 ZNF737O75373 536 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 IGLV3-1P01715 115 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 ALOX5APP20292 161 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 HCCSP53701 268 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 MICAQ29983 383 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 ASRGL1Q7L266 308 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 PIGWQ7Z7B1 504 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 BCAS4Q8TDM0 211 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 ITFG2Q969R8 447 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 NIPSNAP1Q9BPW8 284 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 SLC25A33Q9BSK2 321 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 MYLK2Q9H1R3 596 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 LAMP5Q9UJQ1 280 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 SESN1Q9Y6P5 492 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 U3KQV3 271 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 DNAH7Q8WXX0 4024 aa11.12□□□□□ -0.63
VARS-227ENST00000489979 BIRC6Q9NR09 4857 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 PQLC2LA1A4F0 135 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 PRR23D1E9PI22 279 aaPredicted RBP11.11□□□□□ -0.63
VARS-227ENST00000489979 H3BN98 237 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 DHRS3O75911 302 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 DNAJC8O75937 253 aaPredicted RBP11.11□□□□□ -0.63
VARS-227ENST00000489979 PRR23D2P0DMB1 279 aaPredicted RBP11.11□□□□□ -0.63
VARS-227ENST00000489979 HTR1DP28221 377 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 PRDX6P30041 224 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 MAGEA2P43356 314 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 THBS3P49746 956 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 ERVK11-1P61568 191 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 IL18R1Q13478 541 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 EDDM3AQ14507 147 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 CLVS2Q5SYC1 327 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 OR51D1Q8NGF3 324 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 OR4P4Q8NGL7 312 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 STMN2Q93045 179 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 CDRT15Q96T59 188 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 MCRIP2Q9BUT9 160 aaKnown RBP11.11□□□□□ -0.63
VARS-227ENST00000489979 CLEC7AQ9BXN2 247 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 TMEM133Q9H2Q1 129 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 CCDC134Q9H6E4 229 aa11.11□□□□□ -0.63
VARS-227ENST00000489979 SAMHD1Q9Y3Z3 626 aaKnown RBP11.11□□□□□ -0.63
VARS-227ENST00000489979 hADV38S2A0JD32 116 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 TMEM82A0PJX8 343 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 C3orf84H3BNL1 204 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 AMY1AP04745 511 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 AMY2AP04746 511 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 MPZP25189 248 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 LMO1P25800 156 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 ESRRGP62508 458 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 MEF2CQ06413 473 aaPredicted RBP11.1□□□□□ -0.63
VARS-227ENST00000489979 C9orf152Q5JTZ5 239 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 LCN1P1Q5VSP4 162 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 TMEM42Q69YG0 159 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 UNQ9370/PRO34162Q6UXP9 181 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 CYP2R1Q6VVX0 501 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 ANGPTL5Q86XS5 388 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 PGAM4Q8N0Y7 254 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 OR8H2Q8N162 312 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 OSR2Q8N2R0 312 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 TPRX1Q8N7U7 411 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 BBS1Q8NFJ9 593 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 OR10G2Q8NGC3 310 aa11.1□□□□□ -0.63
VARS-227ENST00000489979 RBM14Q96PK6 669 aaKnown RBP11.1□□□□□ -0.63
VARS-227ENST00000489979 KIAA2026Q5HYC2 2103 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms