RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 HS3ST5Q8IZT8 346 aa12.79□□□□□ -0.36
PLOD3-216ENST00000489927 RPS4Y2Q8TD47 263 aa12.79□□□□□ -0.36
PLOD3-216ENST00000489927 FOXRED1Q96CU9 486 aaPredicted RBP12.79□□□□□ -0.36
PLOD3-216ENST00000489927 MALSU1Q96EH3 234 aa12.79□□□□□ -0.36
PLOD3-216ENST00000489927 PRSS22Q9GZN4 317 aa12.79□□□□□ -0.36
PLOD3-216ENST00000489927 HES4Q9HCC6 221 aa12.79□□□□□ -0.36
PLOD3-216ENST00000489927 GPR173Q9NS66 373 aa12.79□□□□□ -0.36
PLOD3-216ENST00000489927 COPS3Q9UNS2 423 aa12.79□□□□□ -0.36
PLOD3-216ENST00000489927 POLDIP2Q9Y2S7 368 aa12.79□□□□□ -0.36
PLOD3-216ENST00000489927 TBL2Q9Y4P3 447 aaKnown RBP12.79□□□□□ -0.36
PLOD3-216ENST00000489927 NOTCH3Q9UM47 2321 aa12.79□□□□□ -0.36
PLOD3-216ENST00000489927 PQLC2LA1A4F0 135 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 ZNF254O75437 659 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 TTRP02766 147 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 BLCAPP62952 87 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 ZNF829Q3KNS6 432 aaPredicted RBP12.78□□□□□ -0.36
PLOD3-216ENST00000489927 CLVS2Q5SYC1 327 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 FOXB2Q5VYV0 432 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 ZNF626Q68DY1 528 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 TMEM42Q69YG0 159 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 ASRGL1Q7L266 308 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 OR11H6Q8NGC7 330 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 OR13D1Q8NGV5 346 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 ZNF556Q9HAH1 456 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 PITPNC1Q9UKF7 332 aa12.78□□□□□ -0.36
PLOD3-216ENST00000489927 CCDC182A6NF36 153 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 A6NIN4 97 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 K7N7A8 449 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 DLGAP1O14490 977 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 GNGT2O14610 69 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 SRSF10O75494 262 aaKnown RBP12.77□□□□□ -0.37
PLOD3-216ENST00000489927 ZNF728P0DKX0 622 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 JUNBP17275 347 aaPredicted RBP12.77□□□□□ -0.37
PLOD3-216ENST00000489927 MPZP25189 248 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 RIDAP52758 137 aaKnown RBP12.77□□□□□ -0.37
PLOD3-216ENST00000489927 ERVK11-1P61568 191 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 ESRRGP62508 458 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 COL10A1Q03692 680 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 TMEM95Q3KNT9 176 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 LCN1P1Q5VSP4 162 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 ANGPTL5Q86XS5 388 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 ADGRG5Q8IZF4 528 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 ASCC1Q8N9N2 400 aaKnown RBP12.77□□□□□ -0.37
PLOD3-216ENST00000489927 ASB17Q8WXJ9 295 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 CCDC124Q96CT7 223 aaKnown RBP12.77□□□□□ -0.37
PLOD3-216ENST00000489927 ASB9Q96DX5 294 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 IKZF2Q9UKS7 526 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 GTF2A1LQ9UNN4 478 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 SLC22A13Q9Y226 551 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 RYR3Q15413 4870 aa12.77□□□□□ -0.37
PLOD3-216ENST00000489927 ZNF737O75373 536 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 RBP4P02753 201 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 IGHV1-8P0DP01 117 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 IGLL1P15814 213 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 PRKACGP22612 351 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 EDDM3BP56851 147 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 DYNC1I2Q13409 638 aaKnown RBP12.76□□□□□ -0.37
PLOD3-216ENST00000489927 SNAPC1Q16533 368 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 ARSJQ5FYB0 599 aaPredicted RBP12.76□□□□□ -0.37
PLOD3-216ENST00000489927 CANT1Q8WVQ1 401 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 LRGUKQ96M69 825 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 SLC25A19Q9HC21 320 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 TVP23BQ9NYZ1 205 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 TMEM14AQ9Y6G1 99 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 V9GYS6 101 aa12.76□□□□□ -0.37
PLOD3-216ENST00000489927 A0A1B0GTI1 187 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 A0A1W2PRX2 142 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 LOC110117498-PIK3R3F6TDL0 507 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 F8VVB4 439 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 F8VWA3 439 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 F2RL2O00254 374 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 MAGEB4O15481 346 aaPredicted RBP12.75□□□□□ -0.37
PLOD3-216ENST00000489927 E2F6O75461 281 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 CD33P20138 364 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 VDAC2P45880 294 aaPredicted RBP12.75□□□□□ -0.37
PLOD3-216ENST00000489927 DYNLT3P51808 116 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 OR12D2P58182 307 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 BCL2L15Q5TBC7 163 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 PLEKHG7Q6ZR37 379 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 TCF23Q7RTU1 214 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 ELMOD2Q8IZ81 293 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 WFDC9Q8NEX5 89 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 OR14K1Q8NGZ2 314 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 NSL1Q96IY1 281 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 CNN2Q99439 309 aaKnown RBP12.75□□□□□ -0.37
PLOD3-216ENST00000489927 APOL4Q9BPW4 351 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 TEX12Q9BXU0 123 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 HILPDAQ9Y5L2 63 aa12.75□□□□□ -0.37
PLOD3-216ENST00000489927 MPIG6BO95866 241 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 GYS2P54840 703 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 GNGT1P63211 74 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 CD83Q01151 205 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 SLC34A1Q06495 639 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 IL24Q13007 206 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 ZNF322Q6U7Q0 402 aaPredicted RBP12.74□□□□□ -0.37
PLOD3-216ENST00000489927 GDPD3Q7L5L3 318 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 OR5AU1Q8NGC0 362 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 TRMT10AQ8TBZ6 339 aaKnown RBP12.74□□□□□ -0.37
PLOD3-216ENST00000489927 ZNF714Q96N38 554 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 OCSTAMPQ9BR26 566 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms