RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 RNF166Q96A37 237 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-218ENST00000489037 ADAT3Q96EY9 351 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-218ENST00000489037 ZNF488Q96MN9 340 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 DCTN5Q9BTE1 182 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 JAM3Q9BX67 310 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 ONECUT1Q9UBC0 465 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 DUX4Q9UBX2 424 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 CAB39Q9Y376 341 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-218ENST00000489037 KPTNQ9Y664 436 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 IGKV1D-17A0A075B6S4 117 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 A0A1W2PQ09 198 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 PLATP00750 562 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 IGHV4-38-2P0DP08 117 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 AMY2BP19961 511 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 PRDX2P32119 198 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 MTCP1P56278 107 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 BLMHQ13867 455 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 DGUOKQ16854 277 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 FIP1L1Q6UN15 594 aaKnown RBP11.81□□□□□ -0.52
BRCA1-218ENST00000489037 LHFPL2Q6ZUX7 228 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 CALHM1Q8IU99 346 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 Q8IYB0 196 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 ZNF561Q8N587 486 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 SIGLECL1Q8N7X8 197 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 TSEN15Q8WW01 171 aaKnown RBP11.81□□□□□ -0.52
BRCA1-218ENST00000489037 SPSB1Q96BD6 273 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 SDSLQ96GA7 329 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 TMEM80Q96HE8 168 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 CEP19Q96LK0 163 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 NRIP2Q9BQI9 281 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 OR14J1Q9UGF5 321 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 DIMT1Q9UNQ2 313 aaKnown RBP11.81□□□□□ -0.52
BRCA1-218ENST00000489037 DHDHQ9UQ10 334 aa11.81□□□□□ -0.52
BRCA1-218ENST00000489037 EFCAB10A6NFE3 127 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 H0YHG0 523 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 KNG1P01042 644 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 SFTPBP07988 381 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 LIMS3P0CW19 117 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 LIMS4P0CW20 117 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 SELLP14151 372 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 AZGP1P25311 298 aaKnown RBP11.8□□□□□ -0.52
BRCA1-218ENST00000489037 POU3F4P49335 361 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 CCDC58Q4VC31 144 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 RPL22L1Q6P5R6 122 aaKnown RBP11.8□□□□□ -0.52
BRCA1-218ENST00000489037 C9orf139Q6ZV77 190 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 SLC25A26Q70HW3 274 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 SERPINA12Q8IW75 414 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 BCL6BQ8N143 479 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-218ENST00000489037 BATF2Q8N1L9 274 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 FGFRL1Q8N441 504 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 KIR3DL3Q8N743 410 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 ZNRF1Q8ND25 227 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 LY6G5BQ8NDX9 201 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 OR5D14Q8NGL3 314 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 GATAD2BQ8WXI9 593 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 ZDHHC16Q969W1 377 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 OPALINQ96PE5 141 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 ZNF649Q9BS31 505 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 ZCCHC4Q9H5U6 513 aa11.8□□□□□ -0.52
BRCA1-218ENST00000489037 FBN1P35555 2871 aaKnown RBP11.79□□□□□ -0.52
BRCA1-218ENST00000489037 TRBV23-1A0A0A0MS06 115 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 A0A1W2PPH5 198 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 E9PI62 339 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 MAGEB3O15480 346 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 FCN3O75636 299 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 INMTO95050 263 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 ZFPL1O95159 310 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 TFF1P04155 84 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 CD2P06729 351 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 MMP9P14780 707 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 ETV1P50549 477 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 ACTG1P63261 375 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 BAMBIQ13145 260 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 STX19Q8N4C7 294 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 OR51A4Q8NGJ6 313 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 OR13C9Q8NGT0 318 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 OR10AC1Q8NH08 325 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 C8orf46Q8TAG6 207 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 TBC1D15Q8TC07 691 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 FAM216AQ8WUB2 273 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 EMG1Q92979 244 aaKnown RBP11.79□□□□□ -0.52
BRCA1-218ENST00000489037 LHX4Q969G2 390 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 SLAMF9Q96A28 289 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 TBX15Q96SF7 602 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 PDCD1LG2Q9BQ51 273 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 SIRPDQ9H106 197 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 VCX3BQ9H321 246 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 ZMAT3Q9HA38 289 aaKnown RBP11.79□□□□□ -0.52
BRCA1-218ENST00000489037 HES4Q9HCC6 221 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 GLS2Q9UI32 602 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 ZNF222Q9UK12 451 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 MAB21L2Q9Y586 359 aa11.79□□□□□ -0.52
BRCA1-218ENST00000489037 IGKV1-27A0A075B6S5 117 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 MT-ND2P03891 347 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 CHRM2P08172 466 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 HCKP08631 526 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 PIPP12273 146 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-218ENST00000489037 GTF2A1P52655 376 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-218ENST00000489037 ERVK11-1P61568 191 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 ST3GAL4Q11206 333 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms