RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 RPA3P35244 121 aaPredicted RBP1.75□□□□□ -2.13
RFC4-213ENST00000489028 SLC18A1P54219 525 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 PPP1CAP62136 330 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 PIGHQ14442 188 aaPredicted RBP1.75□□□□□ -2.13
RFC4-213ENST00000489028 SYCP1Q15431 976 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 OR4D1Q15615 310 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 COX19Q49B96 90 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 RNASE13Q5GAN3 156 aaKnown RBP1.75□□□□□ -2.13
RFC4-213ENST00000489028 KDM4DQ6B0I6 523 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 HBMQ6B0K9 141 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 CLEC6AQ6EIG7 209 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 LRRC6Q86X45 466 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 RNF10Q8N5U6 811 aaKnown RBP1.75□□□□□ -2.13
RFC4-213ENST00000489028 CCNYL1Q8N7R7 359 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 CDRT4Q8N9R6 151 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 CLHC1Q8NHS4 586 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 SLC25A46Q96AG3 418 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 LRRC45Q96CN5 670 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 OR10C1Q96KK4 312 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 SERPINB11Q96P15 392 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 METTL26Q96S19 204 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 CDX2Q99626 313 aaPredicted RBP1.75□□□□□ -2.13
RFC4-213ENST00000489028 MED10Q9BTT4 135 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 NUDT9Q9BW91 350 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 MRPL20Q9BYC9 149 aaKnown RBP1.75□□□□□ -2.13
RFC4-213ENST00000489028 SHCBP1LQ9BZQ2 653 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 C12orf4Q9NQ89 552 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 DDIT4Q9NX09 232 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 MAT2BQ9NZL9 334 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 DNAJC27Q9NZQ0 273 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 PRO0628Q9UI54 55 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 POFUT2Q9Y2G5 429 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 FADS3Q9Y5Q0 445 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 ZNF608Q9ULD9 1512 aaPredicted RBP1.75□□□□□ -2.13
RFC4-213ENST00000489028 YEATS2Q9ULM3 1422 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 EIF4G1Q04637 1599 aaKnown RBP1.74□□□□□ -2.13
RFC4-213ENST00000489028 A0A0G2JMP0 313 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 A0A0X1KG70 313 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 ISPDA4D126 451 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 UPK2O00526 184 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 UBDO15205 165 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 CRXO43186 299 aaPredicted RBP1.74□□□□□ -2.13
RFC4-213ENST00000489028 CCNE2O96020 404 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 CYB5R3P00387 301 aaPredicted RBP1.74□□□□□ -2.13
RFC4-213ENST00000489028 IGLV3-25P01717 112 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 HLA-DQB1P01920 261 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 MAS1P04201 325 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 OR4Q2P0C623 313 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 ZNF806P0C7X5 589 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 LINC00869P0C866 280 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 UGT2B10P36537 528 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 HTR2BP41595 481 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 KIR3DL2P43630 455 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 TTPAP49638 278 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 RAB38P57729 211 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 GRB2P62993 217 aaKnown RBP1.74□□□□□ -2.13
RFC4-213ENST00000489028 FLOT2Q14254 428 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 PMVKQ15126 192 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 TRIP13Q15645 432 aaPredicted RBP1.74□□□□□ -2.13
RFC4-213ENST00000489028 PRSS8Q16651 343 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 BSXQ3C1V8 233 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 FBXL19-AS1Q494R0 122 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 ATP6AP1LQ52LC2 224 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 DNLZQ5SXM8 178 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 ZNF470Q6ECI4 717 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 CLEC19AQ6UXS0 136 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 AHSA2Q719I0 299 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 SSX7Q7RTT5 188 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 NEGR1Q7Z3B1 354 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 FAM19A1Q7Z5A9 133 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 MRPL52Q86TS9 123 aaKnown RBP1.74□□□□□ -2.13
RFC4-213ENST00000489028 CYP4Z1Q86W10 505 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 BBS7Q8IWZ6 715 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 ZCCHC24Q8N2G6 241 aaKnown RBP1.74□□□□□ -2.13
RFC4-213ENST00000489028 OSR2Q8N2R0 312 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 SPICQ8N5J4 248 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 ACBD4Q8NC06 268 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 OR5T1Q8NG75 326 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 OR5M1Q8NGP8 315 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 OR2Y1Q8NGV0 311 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 OR13G1Q8NGZ3 307 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 NELFBQ8WX92 580 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 GTF2H4Q92759 462 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 RBMXL1Q96E39 390 aaKnown RBP1.74□□□□□ -2.13
RFC4-213ENST00000489028 ZNF75AQ96N20 296 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 DOK1Q99704 481 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 API5Q9BZZ5 524 aaKnown RBP1.74□□□□□ -2.13
RFC4-213ENST00000489028 NDEL1Q9GZM8 345 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 NXF2Q9GZY0 626 aaKnown RBP1.74□□□□□ -2.13
RFC4-213ENST00000489028 WFDC1Q9HC57 220 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 DIABLOQ9NR28 239 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 SDHAF3Q9NRP4 125 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 CYB5R1Q9UHQ9 305 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 RAB22AQ9UL26 194 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 USH1CQ9Y6N9 552 aa1.74□□□□□ -2.13
RFC4-213ENST00000489028 CCL15-CCL14A0A0B4J2E2 113 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 TMEM72A0PK05 275 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 TRPC5OSA6NMA1 111 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 A8MWL6 223 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 K7EM74 188 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms