RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 RSU1Q15404 277 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 SLC22A6Q4U2R8 563 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 NHLRC3Q5JS37 347 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 UBE2NLQ5JXB2 153 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 OR10K2Q6IF99 312 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 ZNF826PQ6ZT77 177 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 LRRC28Q86X40 367 aaPredicted RBP13.52□□□□□ -0.25
CLDN11-208ENST00000488989 LAX1Q8IWV1 398 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 Q8IYB0 196 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 SAMD12Q8N8I0 201 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 TMEM104Q8NE00 496 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 RAB40AQ8WXH6 277 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 SLAMF9Q96A28 289 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 CEP19Q96LK0 163 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 NRIP2Q9BQI9 281 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 TM2D1Q9BX74 207 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 CACNG6Q9BXT2 260 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 RAB1BQ9H0U4 201 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 SAP30LQ9HAJ7 183 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 HES4Q9HCC6 221 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 UFSP2Q9NUQ7 469 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 C1orf123Q9NWV4 160 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 RHBDL2Q9NX52 303 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 LAMP3Q9UQV4 416 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 AKAP6Q13023 2319 aa13.52□□□□□ -0.25
CLDN11-208ENST00000488989 FASNP49327 2511 aaKnown RBP13.52□□□□□ -0.25
CLDN11-208ENST00000488989 IGHV3-64DA0A0J9YX35 117 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 SRRM5B3KS81 715 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 RGS5O15539 181 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 LHBP01229 141 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 BCL3P20749 454 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 SSTR2P30874 369 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 NPBWR2P48146 333 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 EFNB2P52799 333 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 ART1P52961 327 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 FGF12P61328 243 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 LSAMPQ13449 338 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 MOGAT3Q86VF5 341 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 OR51T1Q8NGJ9 327 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 OR10K1Q8NGX5 313 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 NEU4Q8WWR8 484 aaPredicted RBP13.51□□□□□ -0.25
CLDN11-208ENST00000488989 TMEM59Q9BXS4 323 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 LPAR5Q9H1C0 372 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 ELL3Q9HB65 397 aaPredicted RBP13.51□□□□□ -0.25
CLDN11-208ENST00000488989 DECR2Q9NUI1 292 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 ADAM30Q9UKF2 790 aa13.51□□□□□ -0.25
CLDN11-208ENST00000488989 GCN1Q92616 2671 aaKnown RBP13.51□□□□□ -0.25
CLDN11-208ENST00000488989 USF3Q68DE3 2245 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 F8VVB4 439 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 F8VWA3 439 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 IFNL4K9M1U5 179 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 AKR7A2O43488 359 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 HTR3BO95264 441 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 MPIG6BO95866 241 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 HPXP02790 462 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 CSTBP04080 98 aaKnown RBP13.5□□□□□ -0.25
CLDN11-208ENST00000488989 EIF4EP06730 217 aaKnown RBP13.5□□□□□ -0.25
CLDN11-208ENST00000488989 GTF2F2P13984 249 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 MGMTP16455 207 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 ELK1P19419 428 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 SERPINA2P20848 420 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 TNFSF8P32971 234 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 S100A5P33763 92 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 ETV6P41212 452 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 RPS27AP62979 156 aaKnown RBP13.5□□□□□ -0.25
CLDN11-208ENST00000488989 FAM189A2Q15884 450 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 BIVMQ86UB2 503 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 CCDC190Q86UF4 302 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 CMTM4Q8IZR5 234 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 OSR2Q8N2R0 312 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 FAM89BQ8N5H3 189 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 GCSAMQ8N6F7 178 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 Q96M66 194 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 VRK1Q99986 396 aaPredicted RBP13.5□□□□□ -0.25
CLDN11-208ENST00000488989 HMG20AQ9NP66 347 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 RBFOX1Q9NWB1 397 aaKnown RBP13.5□□□□□ -0.25
CLDN11-208ENST00000488989 PPP1R3CQ9UQK1 317 aa13.5□□□□□ -0.25
CLDN11-208ENST00000488989 A0A0A6YYH2 397 aa13.49□□□□□ -0.25
CLDN11-208ENST00000488989 A6NJ64 397 aa13.49□□□□□ -0.25
CLDN11-208ENST00000488989 TPD52L2O43399 206 aaKnown RBP13.49□□□□□ -0.25
CLDN11-208ENST00000488989 CRTAPO75718 401 aaPredicted RBP13.49□□□□□ -0.25
CLDN11-208ENST00000488989 MRPS11P82912 194 aaKnown RBP13.49□□□□□ -0.25
CLDN11-208ENST00000488989 FAM58AQ8N1B3 248 aa13.49□□□□□ -0.25
CLDN11-208ENST00000488989 OR11L1Q8NGX0 322 aa13.49□□□□□ -0.25
CLDN11-208ENST00000488989 LRRC29Q8WV35 223 aa13.49□□□□□ -0.25
CLDN11-208ENST00000488989 HPS1Q92902 700 aa13.49□□□□□ -0.25
CLDN11-208ENST00000488989 FAM46BQ96A09 425 aa13.49□□□□□ -0.25
CLDN11-208ENST00000488989 ZNF488Q96MN9 340 aa13.49□□□□□ -0.25
CLDN11-208ENST00000488989 SOSTQ9BQB4 213 aa13.49□□□□□ -0.25
CLDN11-208ENST00000488989 NUDT16L1Q9BRJ7 211 aaKnown RBP13.49□□□□□ -0.25
CLDN11-208ENST00000488989 URM1Q9BTM9 101 aaKnown RBP13.49□□□□□ -0.25
CLDN11-208ENST00000488989 BANF2Q9H503 90 aa13.49□□□□□ -0.25
CLDN11-208ENST00000488989 RASL12Q9NYN1 266 aa13.49□□□□□ -0.25
CLDN11-208ENST00000488989 RNF7Q9UBF6 113 aa13.49□□□□□ -0.25
CLDN11-208ENST00000488989 A0A0A6YYD4 124 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 hCG_1807616A0A1W2PRN6 198 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 METTL21EPA6NDL7 271 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A10PA6NDY2 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A18PA6NE21 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A16PA6NEW6 464 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms