RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 PMPCAQ10713 525 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 ATPAF1Q5TC12 328 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-230ENST00000488543 NSUN5P2Q63ZY6 315 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 TFAP2EQ6VUC0 442 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 COLCA1Q6ZS62 124 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 OR1S1Q8NH92 325 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 BCL2L2Q92843 193 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-230ENST00000488543 WNT2BQ93097 391 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 C10orf35Q96D05 121 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 ZNF75AQ96N20 296 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 C1QTNF5Q9BXJ0 243 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 CHST5Q9GZS9 411 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 GLRX2Q9NS18 164 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 FBLN5Q9UBX5 448 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 DHRS7CA6NNS2 312 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 FAM25EA8MYX2 175 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 MTRF1O75570 445 aaKnown RBP10.51□□□□□ -0.73
HDAC6-230ENST00000488543 COX5BP10606 129 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 OR3A4PP47883 348 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 ANGPTL5Q86XS5 388 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 SCARB1Q8WTV0 552 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 C15orf40Q8WUR7 153 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 PP6455Q8WZ26 134 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 TMPRSS13Q9BYE2 586 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 TINAGQ9UJW2 476 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 RAB22AQ9UL26 194 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 PRR14LQ5THK1 2151 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 hCG_38984A0A1B0GV85 526 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 TMEM14DPA8MWL7 114 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 HCKP08631 526 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 ZNF735P0CB33 412 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 ZP3P21754 424 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 CAPZA1P52907 286 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 PRSS12P56730 875 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 ZNF92Q03936 586 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 TSC22D1Q15714 1073 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 HIKESHIQ53FT3 197 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 GFRALQ6UXV0 394 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 BPIFB2Q8N4F0 458 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 C12orf45Q8N5I9 185 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-230ENST00000488543 CHST4Q8NCG5 386 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 SEMA6DQ8NFY4 1073 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 OR13C8Q8NGS7 320 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 FAM57AQ8TBR7 257 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 ST8SIA4Q92187 359 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 VSIG4Q9Y279 399 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 MRPS28Q9Y2Q9 187 aaKnown RBP10.5□□□□□ -0.73
HDAC6-230ENST00000488543 CACNA1BQ00975 2339 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 B3GALNT1O75752 331 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 CD79AP11912 226 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 FAM3AP98173 230 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 DHRS2Q13268 280 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 AWAT2Q6E213 333 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 PCSK4Q6UW60 755 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 DOLPP1Q86YN1 238 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 ZNF584Q8IVC4 421 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 NPRL2Q8WTW4 380 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 SPSB4Q96A44 273 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 MRGPRFQ96AM1 343 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 PRR13Q9NZ81 148 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 NOP16Q9Y3C1 178 aaKnown RBP10.5□□□□□ -0.73
HDAC6-230ENST00000488543 USP24Q9UPU5 2620 aa10.5□□□□□ -0.73
HDAC6-230ENST00000488543 A0A0A6YYH2 397 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 A6NJ64 397 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 TNFSF13O75888 250 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 ARR3P36575 388 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 RAB1AP62820 205 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 CDNFQ49AH0 187 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 TMEM42Q69YG0 159 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 GLIPR1L1Q6UWM5 242 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 ZNF546Q86UE3 836 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 CASTOR1Q8WTX7 329 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 RGCCQ9H4X1 137 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 GPR173Q9NS66 373 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 TAS2R8Q9NYW2 309 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 ZNF391Q9UJN7 358 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 PLEKHA6Q9Y2H5 1048 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 HMSDA8MTL9 139 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 VSTM5A8MXK1 200 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 ZNF736B4DX44 427 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-230ENST00000488543 TRIM77I1YAP6 450 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 RAB27BO00194 218 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 CYB5AP00167 134 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 HLA-AP01891 365 aaKnown RBP10.49□□□□□ -0.73
HDAC6-230ENST00000488543 CCL2P13500 99 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 GSK3AP49840 483 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 ATP1B3P54709 279 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 TAS2R19P59542 299 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 RIPPLY1Q0D2K3 151 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 KLRB1Q12918 225 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 KISS1Q15726 138 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 ELP2Q6IA86 826 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 OR2W3Q7Z3T1 314 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 FJX1Q86VR8 437 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 POM121L2Q96KW2 1035 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 PFDN2Q9UHV9 154 aa10.49□□□□□ -0.73
HDAC6-230ENST00000488543 A0A1W2PR80 420 aa10.48□□□□□ -0.73
HDAC6-230ENST00000488543 MBD3L4A6NDZ8 208 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-230ENST00000488543 MBD3L3A6NE82 208 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-230ENST00000488543 MBD3L5A6NJ08 208 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms