RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 HRASLS2Q9NWW9 162 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 MRPS23Q9Y3D9 190 aaKnown RBP9.33□□□□□ -0.92
CCDC171-208ENST00000486641 CBY1Q9Y3M2 126 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 MTCH2Q9Y6C9 303 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 VCANP13611 3396 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 TMED7-TICAM2A0A0A6YYA0 188 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 CLDN34H7C241 214 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 TGOLN2O43493 480 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 NPIPB7O75200 414 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 PGA3P0DJD8 388 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 ZNF17P17021 662 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 AKT2P31751 481 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 ECI1P42126 302 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 SLC6A8P48029 635 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 RPL23AP62750 156 aaKnown RBP9.32□□□□□ -0.92
CCDC171-208ENST00000486641 FOXF1Q12946 379 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 ZNF880Q6PDB4 577 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 FBXL14Q8N1E6 418 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 GPR137CQ8N3F9 429 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 C11orf40Q8WZ69 217 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 TMEM131Q92545 1883 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 HAS2Q92819 552 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 BOD1Q96IK1 185 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 C18orf12Q96KH6 178 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 HDHD3Q9BSH5 251 aaPredicted RBP9.32□□□□□ -0.92
CCDC171-208ENST00000486641 TMEM106CQ9BVX2 250 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 DECR2Q9NUI1 292 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 DKKL1Q9UK85 242 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 MCTS1Q9ULC4 181 aaKnown RBP9.32□□□□□ -0.92
CCDC171-208ENST00000486641 IGKV1-9A0A0C4DH69 117 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 A0A0J9YY10 115 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 MS4A18H0YCH9 400 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 OR4A8P0C604 315 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 GP1BBP13224 206 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 DUSP1P28562 367 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 PCP4P48539 62 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 H3F3AP84243 136 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 COL10A1Q03692 680 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 NFATC4Q14934 902 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 MS4A18Q3C1V0 323 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 TANGO2Q6ICL3 276 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 OGFOD3Q6PK18 319 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 ABHD12BQ7Z5M8 362 aaPredicted RBP9.32□□□□□ -0.92
CCDC171-208ENST00000486641 SFTPA2Q8IWL1 248 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 OR1P1Q8NH06 330 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 ASB10Q8WXI3 467 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 TOMM40LQ969M1 308 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 THOC3Q96J01 351 aaKnown RBP9.32□□□□□ -0.92
CCDC171-208ENST00000486641 FAM71F1Q96KD3 344 aaPredicted RBP9.32□□□□□ -0.92
CCDC171-208ENST00000486641 NAA60Q9H7X0 242 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 TMEM242Q9NWH2 141 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 ZNF319Q9P2F9 582 aa9.32□□□□□ -0.92
CCDC171-208ENST00000486641 ARHGEF17Q96PE2 2063 aaPredicted RBP9.32□□□□□ -0.92
CCDC171-208ENST00000486641 TRBV24-1A0A075B6N3 115 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 FAM230AA0A1W2PPH8 454 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 A6NCN8 305 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 H0Y8X5 98 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 AHSA1O95433 338 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 GCGP01275 180 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 RAB4AP20338 218 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 OMGP23515 440 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 SLC37A1P57057 533 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 FAM189A2Q15884 450 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 DNM1P34Q6PK57 102 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 C6orf201Q7Z4U5 140 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 C17orf78Q8N4C9 275 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 OR14L1PQ8NHC6 308 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 GPR119Q8TDV5 335 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 RTN4IP1Q8WWV3 396 aaPredicted RBP9.31□□□□□ -0.92
CCDC171-208ENST00000486641 ADGRG7Q96K78 797 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 CALHM2Q9HA72 323 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 GPR84Q9NQS5 396 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 SLC7A11Q9UPY5 501 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 MYO7AQ13402 2215 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 A0A1B0GU03 582 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 IGSF23A1L1A6 192 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 FAM221AA4D161 298 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 CDC14CA4D256 554 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 C17orf105B2RV13 164 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 H0YIG0 161 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 MSTNO14793 375 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 RRP8O43159 456 aaKnown RBP9.31□□□□□ -0.92
CCDC171-208ENST00000486641 DFFBO76075 338 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 CYB5R3P00387 301 aaPredicted RBP9.31□□□□□ -0.92
CCDC171-208ENST00000486641 JMJD7P0C870 316 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 ZNF43P17038 809 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 SFTPDP35247 375 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 NOVA1P51513 510 aaKnown RBP9.31□□□□□ -0.92
CCDC171-208ENST00000486641 TDGF1P3P51864 188 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 ZFP36L1Q07352 338 aaKnown RBP9.31□□□□□ -0.92
CCDC171-208ENST00000486641 ZNF266Q14584 549 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 RAB35Q15286 201 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 TAF9Q16594 264 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 CRIP3Q6Q6R5 217 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 CPEB2Q7Z5Q1 589 aaKnown RBP9.31□□□□□ -0.92
CCDC171-208ENST00000486641 OR2C3Q8N628 320 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 METTL27Q8N6F8 245 aaPredicted RBP9.31□□□□□ -0.92
CCDC171-208ENST00000486641 ZNF248Q8NDW4 579 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 OR10J5Q8NHC4 309 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 SSC4DQ8WTU2 575 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms