RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 TNFAIP8L1Q8WVP5 186 aa9.56□□□□□ -0.88
NUP50-216ENST00000486184 FOXRED1Q96CU9 486 aaPredicted RBP9.56□□□□□ -0.88
NUP50-216ENST00000486184 SNTG1Q9NSN8 517 aa9.56□□□□□ -0.88
NUP50-216ENST00000486184 CSMD2Q7Z408 3487 aa9.56□□□□□ -0.88
NUP50-216ENST00000486184 ITPR3Q14573 2671 aa9.56□□□□□ -0.88
NUP50-216ENST00000486184 IGHV3OR15-7A0A075B7D8 119 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 IGHV4-61A0A0C4DH41 118 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 LOC100506127A0A0U1RQW1 187 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 WNT9BO14905 357 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 NDUFA2O43678 99 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 ANGPTL7O43827 346 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 FSTL3O95633 263 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 CD99P14209 185 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 RPS2P15880 293 aaKnown RBP9.55□□□□□ -0.88
NUP50-216ENST00000486184 RSU1Q15404 277 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 TEX36Q5VZQ5 186 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 C22orf42Q6IC83 251 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 CD200R1LQ6Q8B3 271 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 DCDC5Q6ZRR9 648 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 CDH26Q8IXH8 852 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 SAXO1Q8IYX7 474 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 ZSCAN4Q8NAM6 433 aaPredicted RBP9.55□□□□□ -0.88
NUP50-216ENST00000486184 MAPK1IP1LQ8NDC0 245 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 OR8B3Q8NGG8 313 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 CLDND2Q8NHS1 167 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 EMG1Q92979 244 aaKnown RBP9.55□□□□□ -0.88
NUP50-216ENST00000486184 C12orf43Q96C57 262 aaKnown RBP9.55□□□□□ -0.88
NUP50-216ENST00000486184 C18orf12Q96KH6 178 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 ZNF488Q96MN9 340 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 OR8B2Q96RD0 313 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 CHCHD6Q9BRQ6 235 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 TMEM246Q9BRR3 403 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 WDR13Q9H1Z4 485 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 ZNF665Q9H7R5 613 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 TMEM165Q9HC07 324 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 PCDHB16Q9NRJ7 776 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 NLKQ9UBE8 527 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 MIOXQ9UGB7 285 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 SCOCQ9UIL1 159 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 ING4Q9UNL4 249 aa9.55□□□□□ -0.88
NUP50-216ENST00000486184 YLPM1P49750 1951 aaKnown RBP9.55□□□□□ -0.88
NUP50-216ENST00000486184 CREBBPQ92793 2442 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 DOCK11Q5JSL3 2073 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 CEACAM18A8MTB9 384 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 ADAM20O43506 726 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 NOS1APO75052 506 aaPredicted RBP9.54□□□□□ -0.88
NUP50-216ENST00000486184 GYPAP02724 150 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 CSTBP04080 98 aaKnown RBP9.54□□□□□ -0.88
NUP50-216ENST00000486184 ACAA1P09110 424 aaPredicted RBP9.54□□□□□ -0.88
NUP50-216ENST00000486184 BCL3P20749 454 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 GADD45AP24522 165 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 FGF9P31371 208 aaPredicted RBP9.54□□□□□ -0.88
NUP50-216ENST00000486184 PTGFRP43088 359 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 RANBP1P43487 201 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 GABRA2P47869 451 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 OR3A4PP47883 348 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 PSMD7P51665 324 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 BMXP51813 675 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 HOXA4Q00056 320 aaPredicted RBP9.54□□□□□ -0.88
NUP50-216ENST00000486184 AWAT2Q6E213 333 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 ACP7Q6ZNF0 438 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 SLC36A1Q7Z2H8 476 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 GPR141Q7Z602 305 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 FAM90A1Q86YD7 464 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 FAM58AQ8N1B3 248 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 NEIL1Q96FI4 390 aaPredicted RBP9.54□□□□□ -0.88
NUP50-216ENST00000486184 KCTD7Q96MP8 289 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 NRIP2Q9BQI9 281 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 UQCC2Q9BRT2 126 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 METTL9Q9H1A3 318 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 OR51E2Q9H255 320 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 RHOFQ9HBH0 211 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 PLGRKTQ9HBL7 147 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 TXNL4BQ9NX01 149 aaKnown RBP9.54□□□□□ -0.88
NUP50-216ENST00000486184 MTCH1Q9NZJ7 389 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 OR14J1Q9UGF5 321 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 GLS2Q9UI32 602 aa9.54□□□□□ -0.88
NUP50-216ENST00000486184 MRPS28Q9Y2Q9 187 aaKnown RBP9.54□□□□□ -0.88
NUP50-216ENST00000486184 OR2AT4A6NND4 320 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.53□□□□□ -0.88
NUP50-216ENST00000486184 TMPRSS2O15393 492 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 AIREO43918 545 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 ZNF780AO75290 641 aaPredicted RBP9.53□□□□□ -0.88
NUP50-216ENST00000486184 KDM4BO94953 1096 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 HTR3BO95264 441 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 IGHV2-5P01817 119 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 PRKACAP17612 351 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 CPT2P23786 658 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 GZMKP49863 264 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 SNU13P55769 128 aaKnown RBP9.53□□□□□ -0.88
NUP50-216ENST00000486184 ZP1P60852 638 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 GPR176Q14439 515 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 ESCO2Q56NI9 601 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 GDPGP1Q6ZNW5 385 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 RNF144BQ7Z419 303 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 LRRTM1Q86UE6 522 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 PXT1Q8NFP0 134 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 OR5T2Q8NGG2 359 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 OR13F1Q8NGS4 319 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 YIPF6Q96EC8 236 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms