RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 C10orf105Q8TEF2 133 aa16.77■□□□□ 0.28
TRAPPC12-220ENST00000482645 LRRC29Q8WV35 223 aa16.77■□□□□ 0.28
TRAPPC12-220ENST00000482645 FOXRED1Q96CU9 486 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC12-220ENST00000482645 BPESC1Q9GZL8 116 aa16.77■□□□□ 0.28
TRAPPC12-220ENST00000482645 CNTD2Q9H8S5 307 aa16.77■□□□□ 0.28
TRAPPC12-220ENST00000482645 RNF7Q9UBF6 113 aa16.77■□□□□ 0.28
TRAPPC12-220ENST00000482645 ISPDA4D126 451 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 TMEM178BH3BS89 294 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 SLC17A2O00624 439 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 RIN1Q13671 783 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 AWAT2Q6E213 333 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 CRIP3Q6Q6R5 217 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 PEG10Q86TG7 708 aaKnown RBP16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 LYPD6Q86Y78 171 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 C1orf87Q8N0U7 546 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 BATF2Q8N1L9 274 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 OR4D6Q8NGJ1 314 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 TNFAIP8L1Q8WVP5 186 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 UQCC2Q9BRT2 126 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 TLNRD1Q9H1K6 362 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 NARFLQ9H6Q4 476 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 LIN7BQ9HAP6 207 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 STEAP1Q9UHE8 339 aa16.76■□□□□ 0.27
TRAPPC12-220ENST00000482645 C3orf80F5H4A9 247 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 AKR7A2O43488 359 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 HTR2CP28335 458 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 TMEM33P57088 247 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 DNM1P46Q6ZS02 220 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 AQP3Q92482 292 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 AP3S1Q92572 193 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 TIMD4Q96H15 378 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 SLIRPQ9GZT3 109 aaKnown RBP16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 PTTG2Q9NZH5 202 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 MRPS28Q9Y2Q9 187 aaKnown RBP16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 WIPI2Q9Y4P8 454 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 J3QT63 122 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 IFNL4K9M1U5 179 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 NDUFS8O00217 210 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 SPRY1O43609 319 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 SYNGR1O43759 233 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 CD80P33681 288 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 C1orf100Q5SVJ3 147 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 SFRP4Q6FHJ7 346 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 SLC25A26Q70HW3 274 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 CDH26Q8IXH8 852 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 MCFD2Q8NI22 146 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 ZNF671Q8TAW3 534 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 RAB1CQ92928 201 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 C6orf62Q9GZU0 229 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 KCNK15Q9H427 330 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 NPTNQ9Y639 398 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 OTOGQ6ZRI0 2925 aa16.75■□□□□ 0.27
TRAPPC12-220ENST00000482645 SNRPBP14678 240 aaKnown RBP16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 EGR1P18146 543 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 GIFP27352 417 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 NR4A2P43354 598 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 ZP1P60852 638 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 ZNF181Q2M3W8 571 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 ZNF404Q494X3 552 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 GCSAMQ8N6F7 178 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 DEFB108BQ8NET1 73 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 LGALS14Q8TCE9 139 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 SLAMF9Q96A28 289 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 ZNF488Q96MN9 340 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 SMURF1Q9HCE7 757 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 POLDIP2Q9Y2S7 368 aa16.74■□□□□ 0.27
TRAPPC12-220ENST00000482645 ZNF469Q96JG9 3925 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC12-220ENST00000482645 CREBBPQ92793 2442 aa16.73■□□□□ 0.27
TRAPPC12-220ENST00000482645 RNF223E7ERA6 249 aa16.73■□□□□ 0.27
TRAPPC12-220ENST00000482645 ANGPTL7O43827 346 aa16.73■□□□□ 0.27
TRAPPC12-220ENST00000482645 TMEM225BP0DP42 221 aa16.73■□□□□ 0.27
TRAPPC12-220ENST00000482645 CFPP27918 469 aa16.73■□□□□ 0.27
TRAPPC12-220ENST00000482645 BTG1P62324 171 aa16.73■□□□□ 0.27
TRAPPC12-220ENST00000482645 FAM166AQ6J272 317 aa16.73■□□□□ 0.27
TRAPPC12-220ENST00000482645 GLIPR1L1Q6UWM5 242 aa16.73■□□□□ 0.27
TRAPPC12-220ENST00000482645 ELL3Q9HB65 397 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC12-220ENST00000482645 PPIAL4EA0A075B759 164 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 IGHV3OR15-7A0A075B7D8 119 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 PPIAL4DF5H284 164 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 WNT9BO14905 357 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 PAHP00439 452 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 PPIAL4FP0DN26 164 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 CD37P11049 281 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 SLC25A16P16260 332 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 PTGFRP43088 359 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 ZMYND11Q15326 602 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 OR51D1Q8NGF3 324 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 SLC25A28Q96A46 364 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 SEH1LQ96EE3 360 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 S100A13Q99584 98 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 PKIBQ9C010 78 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 WDR13Q9H1Z4 485 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 COMMD3Q9UBI1 195 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 ING4Q9UNL4 249 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 PPIAL4AQ9Y536 164 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 ITPR3Q14573 2671 aa16.72■□□□□ 0.27
TRAPPC12-220ENST00000482645 CYB5AP00167 134 aa16.71■□□□□ 0.27
TRAPPC12-220ENST00000482645 ARSBP15848 533 aa16.71■□□□□ 0.27
TRAPPC12-220ENST00000482645 GLRA1P23415 457 aa16.71■□□□□ 0.27
TRAPPC12-220ENST00000482645 MPZP25189 248 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms