RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 GSKIPQ9P0R6 139 aa4.14□□□□□ -1.75
PTCD3-212ENST00000477520 SEMA5BQ9P283 1151 aa4.14□□□□□ -1.75
PTCD3-212ENST00000477520 B3GAT1Q9P2W7 334 aa4.14□□□□□ -1.75
PTCD3-212ENST00000477520 CKLFQ9UBR5 152 aa4.14□□□□□ -1.75
PTCD3-212ENST00000477520 UQCR10Q9UDW1 63 aa4.14□□□□□ -1.75
PTCD3-212ENST00000477520 TUBD1Q9UJT1 453 aa4.14□□□□□ -1.75
PTCD3-212ENST00000477520 RAB22AQ9UL26 194 aa4.14□□□□□ -1.75
PTCD3-212ENST00000477520 RNF150Q9ULK6 438 aa4.14□□□□□ -1.75
PTCD3-212ENST00000477520 SLC45A2Q9UMX9 530 aa4.14□□□□□ -1.75
PTCD3-212ENST00000477520 MRPS16Q9Y3D3 137 aaKnown RBP4.14□□□□□ -1.75
PTCD3-212ENST00000477520 ANAPC1Q9H1A4 1944 aa4.14□□□□□ -1.75
PTCD3-212ENST00000477520 F5P12259 2224 aa4.14□□□□□ -1.75
PTCD3-212ENST00000477520 C2orf16Q68DN1 1984 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 NUP205Q92621 2012 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 TRAV9-1A0A075B6T8 112 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 A0A1B0GU03 582 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 K7N7A8 449 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 M0R3H8 397 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 DVL2O14641 736 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 AGPAT2O15120 278 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 ARPC3O15145 178 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 LINC01565O15544 149 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 DEDDO75618 318 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 SCGB1D1O95968 90 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 CH25HO95992 272 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 IFNA1P01562 189 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 IGLV3-27P01718 113 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 LCATP04180 440 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 IFI6P09912 130 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 PRSS56P0CW18 603 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 ESDP10768 282 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 CD38P28907 300 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 NTSP30990 170 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 FCGR2CP31995 323 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 SRP14P37108 136 aaKnown RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 MPLP40238 635 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 ALDH3B1P43353 468 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 DGKEP52429 567 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 TPPP2P59282 170 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 RHOGP84095 191 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF117Q03924 483 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 TRA2AQ13595 282 aaKnown RBP eCLIP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 ENPP2Q13822 863 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 PRSS8Q16651 343 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 C2orf76Q3KRA6 126 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 TM4SF20Q53R12 229 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 TMEM41BQ5BJD5 291 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 C10orf120Q5SQS8 335 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 LY6G5CQ5SRR4 150 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 C1orf185Q5T7R7 199 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 FAM166AQ6J272 317 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 FBXL22Q6P050 247 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 FBXO42Q6P3S6 717 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 KCNIP4Q6PIL6 250 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 AGTRAPQ6RW13 159 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 KIRREL2Q6UWL6 708 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 DPY19L2P2Q6ZN68 376 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 KCTD9Q7L273 389 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 GDF7Q7Z4P5 450 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 RBM45Q8IUH3 476 aaKnown RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 SGPP2Q8IWX5 399 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF679Q8IYX0 411 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 CMTM8Q8IZV2 173 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 CSNK1A1LQ8N752 337 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 C12orf76Q8N812 135 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 CYB561A3Q8NBI2 242 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF248Q8NDW4 579 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 OR4X1Q8NH49 305 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 GPR119Q8TDV5 335 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 RNF128Q8TEB7 428 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 THAP3Q8WTV1 239 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 CASTOR1Q8WTX7 329 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 PTPMT1Q8WUK0 201 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 HAS2Q92819 552 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 EMG1Q92979 244 aaKnown RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 GLYATL1Q969I3 302 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 MRPL24Q96A35 216 aaKnown RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 FAM3DQ96BQ1 224 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 FGGYQ96C11 551 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 RPUSD4Q96CM3 377 aaKnown RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 GMPPAQ96IJ6 420 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 CIB3Q96Q77 187 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 ALKBH3Q96Q83 286 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 RNF2Q99496 336 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 GFI1Q99684 422 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 AGMATQ9BSE5 352 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 FAAP24Q9BTP7 215 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 VAMP8Q9BV40 100 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 HCAR1Q9BXC0 346 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 S1PR5Q9H228 398 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF430Q9H8G1 570 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 GPR35Q9HC97 309 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 Q9N2K0 584 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 CNIH4Q9P003 139 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 TAAR2Q9P1P5 351 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 LSM7Q9UK45 103 aaKnown RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 GPR132Q9UNW8 380 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 ST3GAL6Q9Y274 331 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 VSIG4Q9Y279 399 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 SIGLEC7Q9Y286 467 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms