RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 RFPL4AA6NLU0 287 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 RFPL4AL1F8VTS6 287 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 H0YAE9 185 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 PAHP00439 452 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 KNG1P01042 644 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 SFTPBP07988 381 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 FBP1P09467 338 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 HKR1P10072 659 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 GBX2P52951 348 aaPredicted RBP8.43□□□□□ -1.06
CCM2-208ENST00000476594 DGUOKQ16854 277 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 TUSC1Q2TAM9 212 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 LPCAT4Q643R3 524 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 C16orf87Q6PH81 154 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 UTS2BQ765I0 119 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 FAM185AQ8N0U4 392 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 BCL6BQ8N143 479 aaPredicted RBP8.43□□□□□ -1.06
CCM2-208ENST00000476594 ZSCAN4Q8NAM6 433 aaPredicted RBP8.43□□□□□ -1.06
CCM2-208ENST00000476594 OR13C3Q8NGS6 347 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 RHOXF1Q8NHV9 184 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 PPP1R35Q8TAP8 253 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 LGALS12Q96DT0 336 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 SEH1LQ96EE3 360 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 C4orf36Q96KX1 117 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 CEP19Q96LK0 163 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 MBOAT4Q96T53 435 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 NRIP2Q9BQI9 281 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 ALG8Q9BVK2 526 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 FAM234AQ9H0X4 552 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 DPAGT1Q9H3H5 408 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 PRDM13Q9H4Q3 707 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 ESM1Q9NQ30 184 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 FAM118AQ9NWS6 357 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 CHCHD3Q9NX63 227 aaKnown RBP8.43□□□□□ -1.06
CCM2-208ENST00000476594 IGKV1D-17A0A075B6S4 117 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 A0A1B0GW55 424 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 A6NIN4 97 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 TMEM212A6NML5 194 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 J3QRE1 110 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 HOXA3O43365 443 aaPredicted RBP8.42□□□□□ -1.06
CCM2-208ENST00000476594 SYNGR1O43759 233 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 CHRM2P08172 466 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 DUX4L2P0CJ85 424 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 DUX4L3P0CJ86 424 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 DUX4L4P0CJ87 422 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 DUX4L5P0CJ88 424 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 DUX4L6P0CJ89 424 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 DUX4L7P0CJ90 424 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 MYL12AP19105 171 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 PRDX2P32119 198 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 OR12D2P58182 307 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 RPL31P62899 125 aaKnown RBP8.42□□□□□ -1.06
CCM2-208ENST00000476594 ACSM1Q08AH1 577 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 ALKBH1Q13686 389 aaKnown RBP8.42□□□□□ -1.06
CCM2-208ENST00000476594 SLC9A3R2Q15599 337 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 DEFB112Q30KQ8 113 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 DMRTC1Q5HYR2 192 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 DUX4L9Q6RFH8 374 aaPredicted RBP8.42□□□□□ -1.06
CCM2-208ENST00000476594 Q6YL49 198 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 TMPRSS11AQ6ZMR5 421 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 PRSS35Q8N3Z0 413 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 ASCC1Q8N9N2 400 aaKnown RBP8.42□□□□□ -1.06
CCM2-208ENST00000476594 ZNRF1Q8ND25 227 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 UBE2FQ969M7 185 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 ZNF48Q96MX3 618 aaPredicted RBP8.42□□□□□ -1.06
CCM2-208ENST00000476594 DUX5Q96PT3 197 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 RHOFQ9HBH0 211 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 SIRT7Q9NRC8 400 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 DUX4Q9UBX2 424 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 OR14J1Q9UGF5 321 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 ZNF222Q9UK12 451 aa8.42□□□□□ -1.06
CCM2-208ENST00000476594 SF3B6Q9Y3B4 125 aaKnown RBP8.42□□□□□ -1.06
CCM2-208ENST00000476594 POM121CA8CG34 1229 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 E9PQ18 207 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 H3BSH0 61 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 MAGEB3O15480 346 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 IGHA1P01876 353 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 CD2P06729 351 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 GABRB1P18505 474 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 ATF1P18846 271 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 AMY2BP19961 511 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 AZGP1P25311 298 aaKnown RBP8.41□□□□□ -1.06
CCM2-208ENST00000476594 DCKP27707 260 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 CFPP27918 469 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 KIR3DL2P43630 455 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 POU3F4P49335 361 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 UBE2E1P51965 193 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 MTCP1P56278 107 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 IL18R1Q13478 541 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 UBE2V2Q15819 145 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 AWAT1Q58HT5 328 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 RUSC1-AS1Q66K80 236 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 GDPD3Q7L5L3 318 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 LHFPL3Q86UP9 236 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 ANGPTL5Q86XS5 388 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 CALHM1Q8IU99 346 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 DHRSXQ8N5I4 330 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 OR5D14Q8NGL3 314 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 OR5AK2Q8NH90 309 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 TSEN15Q8WW01 171 aaKnown RBP8.41□□□□□ -1.06
CCM2-208ENST00000476594 CYGBQ8WWM9 190 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms