RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SH3BGRL3Q9H299 93 aa4.4□□□□□ -1.71
CCDC39-204ENST00000476379 WASF3Q9UPY6 502 aa4.4□□□□□ -1.71
CCDC39-204ENST00000476379 ST3GAL6Q9Y274 331 aa4.4□□□□□ -1.71
CCDC39-204ENST00000476379 DYSFO75923 2080 aa4.4□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF724A8MTY0 619 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF814B7Z6K7 855 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 PLPP3O14495 311 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 TERTO14746 1132 aaKnown RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 GFRA3O60609 400 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ABHD16AO95870 558 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 TGM6O95932 706 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 P04436 131 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 SERPINE2P07093 398 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 NAGAP17050 411 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 RAB4BP61018 213 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 UBE2KP61086 200 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 SPINK14Q6IE38 97 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 TMPRSS7Q7RTY8 843 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 MRPL21Q7Z2W9 205 aaKnown RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 CDC20BQ86Y33 519 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF485Q8NCK3 441 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 CLRN3Q8NCR9 226 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 NT5CQ8TCD5 201 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ABHD3Q8WU67 409 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 C15orf40Q8WUR7 153 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 LIPHQ8WWY8 451 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 MCHR2Q969V1 340 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 PNPLA2Q96AD5 504 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 IP6K3Q96PC2 410 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 CNTNAP3Q9BZ76 1288 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 HEXA-AS1Q9H8Q6 139 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 DUSP13Q9UII6 198 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 KIF25Q9UIL4 384 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 GAB2Q9UQC2 676 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 NSG2Q9Y328 171 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 JMJD1CQ15652 2540 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 BORCS7-ASMTA0A0B4J1R7 106 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 A0A0D9SG52 128 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 A0A1W2PQM1 296 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 PLSCR5A0PG75 271 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 TP53I11O14683 189 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 KLF4O43474 513 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ZFAND5O76080 213 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ACTL6AO96019 429 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 TTRP02766 147 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ANOS1P23352 680 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 TAGLN2P37802 199 aaKnown RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 PLA2G5P39877 138 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 SLC6A8P48029 635 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 F2RL1P55085 397 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 TMEM33P57088 247 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 CFHR1Q03591 330 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ADIRFQ15847 76 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 CEACAM16Q2WEN9 425 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 SOHLH1Q5JUK2 328 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 SPANXN5Q5MJ07 72 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 AKR1C8PQ5T2L2 129 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 AVPI1Q5T686 147 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 OR56B1Q8NGI3 324 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 TERB2Q8NHR7 220 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 KCNG3Q8TAE7 436 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 MRPS24Q96EL2 167 aaKnown RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 TVP23CQ96ET8 276 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 USB1Q9BQ65 265 aaKnown RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 AIFM2Q9BRQ8 373 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 RAB22AQ9UL26 194 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ITPR1Q14643 2758 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ARPC3O15145 178 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 SNAPINO95295 136 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 MUC1P15941 1255 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ZP3P21754 424 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 NXPH1P58417 271 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 PPIAP62937 165 aaKnown RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 DCDP81605 110 aaKnown RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 MRPS10P82664 201 aaKnown RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF273Q14593 569 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 SLC35D3Q5M8T2 416 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 AADACL3Q5VUY0 350 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 CST9LP1Q5W188 147 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 EIF5AL1Q6IS14 154 aaKnown RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 PGAP1Q75T13 922 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 BIVMQ86UB2 503 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 FAM185AQ8N0U4 392 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 OR5M9Q8NGP3 310 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 RNF128Q8TEB7 428 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 SLC25A21Q9BQT8 299 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 EXOSC3Q9NQT5 275 aaKnown RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF319Q9P2F9 582 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 RPH3ALQ9UNE2 315 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 KCNMB2Q9Y691 235 aa4.39□□□□□ -1.71
CCDC39-204ENST00000476379 TEP1Q99973 2627 aaKnown RBP4.39□□□□□ -1.71
CCDC39-204ENST00000476379 IGHV1OR21-1A0A087WYE8 117 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 PLXNB1O43157 2135 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 BCL2L11O43521 198 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 HOXD4P09016 255 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 CCL3P10147 92 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ERGP11308 486 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 YPEL5P62699 121 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ANKRD55Q3KP44 614 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF343Q6P1L6 599 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms