RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 GPER1Q99527 375 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 GAL3ST1Q99999 423 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 MICU1Q9BPX6 476 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 TMEM204Q9BSN7 226 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 THAP7Q9BT49 309 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-207ENST00000474825 URM1Q9BTM9 101 aaKnown RBP5.63□□□□□ -1.51
ATG4A-207ENST00000474825 RTL8AQ9BWD3 113 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 TMEM59Q9BXS4 323 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 METTL9Q9H1A3 318 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 KCNK15Q9H427 330 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 SEBOXQ9HB31 216 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-207ENST00000474825 NGBQ9NPG2 151 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 KCNJ16Q9NPI9 418 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 ABCB10Q9NRK6 738 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 TMEM100Q9NV29 134 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 C14orf119Q9NWQ9 140 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 MTFP1Q9UDX5 166 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 KCNK7Q9Y2U2 307 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 ESPL1Q14674 2120 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 PRR14LQ5THK1 2151 aa5.63□□□□□ -1.51
ATG4A-207ENST00000474825 TRAV18A0A075B6X5 111 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 ANKRD20A5PA0PJZ0 165 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 SHISA9B4DS77 424 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 ATP6V1G2-DDX39BF2Z307 99 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 J3QT63 122 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 MFNGO00587 321 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 SOCS1O15524 211 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 ORC5O43913 435 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 MPIG6BO95866 241 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 SFTPBP07988 381 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 OCMP0CE72 109 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-207ENST00000474825 TMEM225BP0DP42 221 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 GTF2F2P13984 249 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 HIST1H1DP16402 221 aaKnown RBP5.62□□□□□ -1.51
ATG4A-207ENST00000474825 IGFBP2P18065 325 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 NAT1P18440 290 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 GNLYP22749 145 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 CPT2P23786 658 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 GCH1P30793 250 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 CD200P41217 278 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 RFX2P48378 723 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 GPM6AP51674 278 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 DEFA1P59665 94 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 DEFA3P59666 94 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 FGF12P61328 243 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 DGCR2P98153 550 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 ZNF154Q13106 437 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 MAB21L1Q13394 359 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 KLF9Q13886 244 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-207ENST00000474825 ARL6IP1Q15041 203 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 PNLIPRP3Q17RR3 467 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 SLC22A6Q4U2R8 563 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 DMRTC1Q5HYR2 192 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 PLAC9Q5JTB6 97 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 SIGIRRQ6IA17 410 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 GDPD3Q7L5L3 318 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 C11orf53Q8IXP5 236 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 DMRTC2Q8IXT2 367 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-207ENST00000474825 OR8H2Q8N162 312 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 OSR2Q8N2R0 312 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 CENPSQ8N2Z9 138 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 ZNF611Q8N823 705 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 OR5D18Q8NGL1 313 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 OR13G1Q8NGZ3 307 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 OR51F2Q8NH61 342 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 OR52I2Q8NH67 350 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 CA5BP1Q8WTZ4 195 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 ITLN2Q8WWU7 325 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-207ENST00000474825 ST8SIA4Q92187 359 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 MRPL24Q96A35 216 aaKnown RBP5.62□□□□□ -1.51
ATG4A-207ENST00000474825 RFT1Q96AA3 541 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 SEH1LQ96EE3 360 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 RNF170Q96K19 258 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 C7orf50Q9BRJ6 194 aaKnown RBP5.62□□□□□ -1.51
ATG4A-207ENST00000474825 ATG5Q9H1Y0 275 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 CXXC4Q9H2H0 198 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 OR51B6Q9H340 312 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 ESRP2Q9H6T0 727 aaKnown RBP5.62□□□□□ -1.51
ATG4A-207ENST00000474825 IFT22Q9H7X7 185 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 CA10Q9NS85 328 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 MTCH1Q9NZJ7 389 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 RCC2Q9P258 522 aaKnown RBP5.62□□□□□ -1.51
ATG4A-207ENST00000474825 NDRG3Q9UGV2 375 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 HSF4Q9ULV5 492 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 ING4Q9UNL4 249 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 PLEKHA6Q9Y2H5 1048 aa5.62□□□□□ -1.51
ATG4A-207ENST00000474825 MYO18BQ8IUG5 2567 aa5.61□□□□□ -1.51
ATG4A-207ENST00000474825 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.61□□□□□ -1.51
ATG4A-207ENST00000474825 NBASA2RRP1 2371 aa5.61□□□□□ -1.51
ATG4A-207ENST00000474825 MEIOCA2RUB1 952 aa5.61□□□□□ -1.51
ATG4A-207ENST00000474825 NKX2-6A6NCS4 301 aa5.61□□□□□ -1.51
ATG4A-207ENST00000474825 H3BUI4 141 aa5.61□□□□□ -1.51
ATG4A-207ENST00000474825 ABCD4O14678 606 aa5.61□□□□□ -1.51
ATG4A-207ENST00000474825 SPRY1O43609 319 aaPredicted RBP5.61□□□□□ -1.51
ATG4A-207ENST00000474825 ANGPTL7O43827 346 aa5.61□□□□□ -1.51
ATG4A-207ENST00000474825 TIMM8AO60220 97 aaPredicted RBP5.61□□□□□ -1.51
ATG4A-207ENST00000474825 FLNBO75369 2602 aaKnown RBP5.61□□□□□ -1.51
ATG4A-207ENST00000474825 CRTAPO75718 401 aaPredicted RBP5.61□□□□□ -1.51
ATG4A-207ENST00000474825 CLDN14O95500 239 aa5.61□□□□□ -1.51
ATG4A-207ENST00000474825 ECDO95905 644 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms