RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 TMEM200AQ86VY9 491 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 GVQW1Q8N7I0 195 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 HPS1Q92902 700 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 C20orf85Q9H1P6 137 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 TMEM100Q9NV29 134 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 RP1L1Q8IWN7 2480 aaPredicted RBP16.93■□□□□ 0.3
SSR1-204ENST00000474597 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.93■□□□□ 0.3
SSR1-204ENST00000474597 AKR7A2O43488 359 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 BCL3P20749 454 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 ALKBH6Q3KRA9 238 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 OR8G5Q8NG78 346 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 OR4D10Q8NGI6 311 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 OR56B4Q8NH76 319 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 CHAC2Q8WUX2 184 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 FZR1Q9UM11 496 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 ALG5Q9Y673 324 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 A0A0B4J293 547 aa16.92■□□□□ 0.3
SSR1-204ENST00000474597 GEMIN2O14893 280 aaKnown RBP16.92■□□□□ 0.3
SSR1-204ENST00000474597 SSX5O60225 188 aa16.92■□□□□ 0.3
SSR1-204ENST00000474597 NPBWR2P48146 333 aa16.92■□□□□ 0.3
SSR1-204ENST00000474597 RBM11P57052 281 aaKnown RBP16.92■□□□□ 0.3
SSR1-204ENST00000474597 MBNL2Q5VZF2 373 aaKnown RBP16.92■□□□□ 0.3
SSR1-204ENST00000474597 C6orf201Q7Z4U5 140 aa16.92■□□□□ 0.3
SSR1-204ENST00000474597 BATF2Q8N1L9 274 aa16.92■□□□□ 0.3
SSR1-204ENST00000474597 KDF1Q8NAX2 398 aaPredicted RBP16.92■□□□□ 0.3
SSR1-204ENST00000474597 OR4S1Q8NGB4 309 aa16.92■□□□□ 0.3
SSR1-204ENST00000474597 NCOR2Q9Y618 2525 aa16.92■□□□□ 0.3
SSR1-204ENST00000474597 M0QYG6 137 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 KITLGP21583 273 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 CCKARP32238 428 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 RAG2P55895 527 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 MRPS15P82914 257 aaKnown RBP16.91■□□□□ 0.3
SSR1-204ENST00000474597 MEF2DQ14814 521 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 RBMS2Q15434 407 aaKnown RBP16.91■□□□□ 0.3
SSR1-204ENST00000474597 RNASE10Q5GAN6 216 aaKnown RBP16.91■□□□□ 0.3
SSR1-204ENST00000474597 ST8SIA4Q92187 359 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 POM121Q96HA1 1249 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 PKIBQ9C010 78 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 HSF4Q9ULV5 492 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 OSGIN2Q9Y236 505 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 PLEKHA6Q9Y2H5 1048 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 LRP5LA4QPB2 252 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 CD74P04233 296 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 AMY2AP04746 511 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 FGF12P61328 243 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 IL24Q13007 206 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 ELP2Q6IA86 826 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 SSX8Q7RTT4 187 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 OR51S1Q8NGJ8 323 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 RADILQ96JH8 1075 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 OR10A4Q9H209 315 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 OR51I2Q9H344 312 aa16.91■□□□□ 0.3
SSR1-204ENST00000474597 TLN1Q9Y490 2541 aaKnown RBP16.9■□□□□ 0.3
SSR1-204ENST00000474597 SHANK1Q9Y566 2161 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 DISC1C4P0D8 188 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 J3QT63 122 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 ERVH48-1M5A8F1 160 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 CCL21O00585 134 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 SYNGR1O43759 233 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 CA11O75493 328 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 NDUFB6O95139 128 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 OR52W1Q6IF63 320 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 Q8NFD4 153 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 DACT3Q96B18 629 aaPredicted RBP16.9■□□□□ 0.3
SSR1-204ENST00000474597 OCSTAMPQ9BR26 566 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 GINS4Q9BRT9 223 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 MTCH1Q9NZJ7 389 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 SCP2D1Q9UJQ7 156 aa16.9■□□□□ 0.3
SSR1-204ENST00000474597 HMX3A6NHT5 357 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 ARPC1BO15143 372 aaKnown RBP16.89■□□□□ 0.29
SSR1-204ENST00000474597 CSN2P05814 226 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 TBPP20226 339 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 SNU13P55769 128 aaKnown RBP16.89■□□□□ 0.29
SSR1-204ENST00000474597 SIGIRRQ6IA17 410 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 BPIFB2Q8N4F0 458 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 TINAGL1Q9GZM7 467 aaPredicted RBP16.89■□□□□ 0.29
SSR1-204ENST00000474597 FLVCR2Q9UPI3 526 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 POLDIP2Q9Y2S7 368 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 DSPP15924 2871 aaKnown RBP16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A10PA6NDY2 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A18PA6NE21 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A16PA6NEW6 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A20PA6NIJ5 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A8PA6NJQ4 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A7PA6NKC0 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 TMEM210A6NLX4 147 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A22PA8MWA6 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A12PA8MX19 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A5PA8MXJ8 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A23PA8MXZ1 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 H0YL77 283 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 PEX14O75381 377 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 CCNKO75909 580 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 OR7C1O76099 320 aaPredicted RBP16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A15PP0C7V4 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A13PP0C7W8 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A14PP0C7W9 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 FAM90A24PP0C7X0 464 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 TRAPPC2P0DI81 140 aa16.89■□□□□ 0.29
SSR1-204ENST00000474597 TRAPPC2BP0DI82 140 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms